Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3730g00014 ATGACGGCGGTGGCCACCAAAATAAGTCGTGTTTCTTCATTTCAGGTGGCCGTTGTGGTGGCGGTTATCCTCGCCGCGGCCACGACGGTGTTGTCGGACGACAACGCGCTGATCCCATCGGACAAAGGTCAATTGGACCAATGGTTCTCAAAGAACGTGCTGCCATTATCAGCCCGGAAGGGTACTCTGGACGCAGAACTGGTGGCCGCCGAAGCTAATCCGAAGACGGTGACGGTGTCGCAGGACGGAAAAGGCGACTTCAAGACGATAACGGACGCCATTAACAGTGTTCCGACGAATAATGCGCAGAGAGTGATAATCAAAATCGCAGGTGGAGTATATAATGAGAAGGTGACCATTGATAGGACCAAGGATTTCATCACTATGATCGGTGATCCTAAAAATATGCCCAACTTGACTTACAATGGTGACGCTAAAAGATACGGCACCGTCGATAGTGCTACCCTCATTACCAACAGCAATTACTTCGTCGCTGCAAATATCATTTTCTCGAACTCGGCACCGATGCCGGATGGGAGAAGGGAGGGAGCTCAGGCGGTGGCGCTACGAGTTTCCGGCAACAATTCGGCATTCTACAACTGCGTGCTATTAGGGTTTCAAGACACACTGTGTGACGATAGGGGAAACCATTTGTTCAAGGACTGCACAATCCAAGGCACAGTGGACTTCATATTTGGGAGTGGCAAGTCCTTGTATCTGAACACGAAGCTCATCGTGGTGGGGACGGTCGGCGGCGTGATCGCGGCTCAGGCGAGGGAGAGCGACGACGACACCATCGGCTATTCCTTCGTTCACTGCGACATAAGTGGCACCGCCAGTGGCACCTTCTTGGGAAGAGCTTGGATGGCTTATGGCAGAGTTGTGTACGCTTATAGCACCATTAGCAACATTATTACTCCTCTTGGTTGGAACATTAACAACCATCCTGCTATGGCCCAGACTGTGTATTTTGGAGAGTACCAGAATAGTGGAGATGGTGCAAATACAAAAGGACGAGCCCCGTTCACAAAGATACTAAATGACGCTGATGCTAAGCAATTCATCTCTCTTGGCTTCATTGAAGCTTCTAAGTGGCTGCTTCCTTCTCCTCAAGCCTAA 1119 0.504 MTAVATKISRVSSFQVAVVVAVILAAATTVLSDDNALIPSDKGQLDQWFSKNVLPLSARKGTLDAELVAAEANPKTVTVSQDGKGDFKTITDAINSVPTNNAQRVIIKIAGGVYNEKVTIDRTKDFITMIGDPKNMPNLTYNGDAKRYGTVDSATLITNSNYFVAANIIFSNSAPMPDGRREGAQAVALRVSGNNSAFYNCVLLGFQDTLCDDRGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLIVVGTVGGVIAAQARESDDDTIGYSFVHCDISGTASGTFLGRAWMAYGRVVYAYSTISNIITPLGWNINNHPAMAQTVYFGEYQNSGDGANTKGRAPFTKILNDADAKQFISLGFIEASKWLLPSPQA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3730g00014 372 Pfam Pectinesterase 77 362 IPR000070 GO:0030599|GO:0042545
Pral3730g00014 372 FunFam Pectinesterase 72 368 - -
Pral3730g00014 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 366 - -
Pral3730g00014 372 SUPERFAMILY Pectin lyase-like 72 368 IPR011050 -
Pral3730g00014 372 ProSitePatterns Pectinesterase signature 2. 224 233 IPR033131 -
Pral3730g00014 372 Gene3D - 74 370 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3730g00014 Pral-Chr3730 138223 140943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3730g00014 16 370 Carbohydrate Esterase AT1G69940 54.494 5.72e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3730g00014 K01051 - egr:104426935 439.884