Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00168 ATGTGTGATGGAAGCTTCTTCCCTTCCCTTCTCAACGGGATGACTGCAGTAGTAGGTTGCTTTAATGAGCGTGCCCAAAATTTGTTAAAGCTCCATCTCGCTTCTGGCTTCAGAAAGTCCTTTTTCTGGTTCAAAGGCAAATTACGTGGAAAACAAACTGCCCTCGTTCAAGAAGGCAAAGACCTGGTTATTTATGCGCTAATTAATGCCATTGCAATCAGAAAGATACTCAAGAAATATGATAAGATTCATTATTCAAAGCAAGGACAATTATTCAAGTCACGAGCACAGAGTATGCACATAGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTCATGGCCTTCCACATCAATTTAAGGGAAAGCAAGAACAAGTCAATGAAGAAGCCACCTGCTTTCTTTCATACATGTTCCCTCACATTTAAGGATGATAAACCATCACTTACTTGTGAGCCATTTGATTCCATCAAACTTGATATTGACTTGACGTGTTCTATATGCTTGGACACTGTATTTGATCCAGTTTGTCTTACTTGTGGCCACATATTCTGCTACATGTGTGCTTGCTCATCTGCATCAGTAACTATTGTTGACGGAGTTAAAGCAGCAAATTCTAATGCAAAATGTCCACTGTGCCGAGTGGGAGGAGTCTATCAAGGTGCTGTGCACTTGGAAGAATTAAATATTCTGTTAGGCCGAAGCTGCAAGGGATACTGGGAACAAAGGCTTCAGATAGAGAGGGTTGAGAGAGTTAAGCAAATAAAAGAGCATTGGGAATCGCAGTGCAGGGCATTTGTGGGCGTCTAA 807 0.4164 MCDGSFFPSLLNGMTAVVGCFNERAQNLLKLHLASGFRKSFFWFKGKLRGKQTALVQEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSRAQSMHIEILQSPWLCELMAFHINLRESKNKSMKKPPAFFHTCSLTFKDDKPSLTCEPFDSIKLDIDLTCSICLDTVFDPVCLTCGHIFCYMCACSSASVTIVDGVKAANSNAKCPLCRVGGVYQGAVHLEELNILLGRSCKGYWEQRLQIERVERVKQIKEHWESQCRAFVGV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00168 268 ProSiteProfiles SPX domain profile. 1 94 IPR004331 -
Pral3722g00168 268 Pfam Zinc finger, C3HC4 type (RING finger) 161 213 - -
Pral3722g00168 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 266 IPR013083 -
Pral3722g00168 268 SMART ring_2 164 212 IPR001841 -
Pral3722g00168 268 ProSitePatterns Zinc finger RING-type signature. 179 188 IPR017907 -
Pral3722g00168 268 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 267 IPR033326 -
Pral3722g00168 268 ProSiteProfiles Zinc finger RING-type profile. 164 213 IPR001841 -
Pral3722g00168 268 SUPERFAMILY RING/U-box 157 214 - -
Pral3722g00168 268 CDD RING-HC_BAH1-like 154 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00168 Pral-Chr3722 694936 697864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00168 161 213 C3H Transcription Factor Family AT4G28270 41.379 1.44e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00168 K16275 - gmx:100797432 446.817