Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00167 ATGAAGTTCTGCAAGAAATACGAGGAGTACATGCAAGGCCAGCAGAAGCAACTTCCGGGAGTTGGTATCAAAAAGCTCAAGAAGATAATGAAAAAATGCAGCGGAGACTGCCGATCCCGCAAAGGCCTCAATGAGGCCATTGGCGTCCGAACCTGCAGCGACCAGTGCCCAGTGTGTGATGGAAGCTTCTTCCCTTCCCTTCTCAACGGGATGACTGCAGTAGTAGGTTGCTTTAATGAGCGTGCCCAAAATTTGTTAAAGCTCCATCTCGCTTCTGGCTTCAGAAAGTCCTTTTTCTGGTTCAAAGGCAAATTACGTGGAAAACAAACTGCCCTCGTTCAAGAAGGCAAAGACCTGGTTATTTATGCGCTAATTAATGCCATTGCAATCAGAAAGATACTCAAGAAATATGATAAGATTCATTATTCAAAGCAAGGACAATTATTCAAGTCACGAGCACAGAGTATGCACATAGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTCATGGCCTTCCACATCAATTTAAGGGAAAGCAAGAACAAGTCAATGAAGAAGCCACCTGCTTTCTTTCATACATGTTCCCTCACATTTAAGGATGATAAACCATCACTTACTTGTGAGCCATTTGATTCCATCAAACTTGATATTGACTTGACGTGTTCTATATGCTTGGACACTGTATTTGATCCAGTTTGTCTTACTTGTGGCCACATATTCTGCTACATGTGTGCTTGCTCATCTGCATCAGTAACTATTGTTGACGGAGTTAAAGCAGCAAATTCTAATGCAAAATGTCCACTGTGCCGAGTGGGAGGAGTCTATCAAGGTGCTGTGCACTTGGAAGAATTAAATATTCTGTTAGGCCGAAGCTGCAAGGGATACTGGGAACAAAGGCTTCAGATAGAGAGGGTTGAGAGAGTTAAGCAAATAAAAGAGCATTGGGAATCGCAGTGCAGGGCATTTGTGGGCGTCTAA 978 0.4335 MKFCKKYEEYMQGQQKQLPGVGIKKLKKIMKKCSGDCRSRKGLNEAIGVRTCSDQCPVCDGSFFPSLLNGMTAVVGCFNERAQNLLKLHLASGFRKSFFWFKGKLRGKQTALVQEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSRAQSMHIEILQSPWLCELMAFHINLRESKNKSMKKPPAFFHTCSLTFKDDKPSLTCEPFDSIKLDIDLTCSICLDTVFDPVCLTCGHIFCYMCACSSASVTIVDGVKAANSNAKCPLCRVGGVYQGAVHLEELNILLGRSCKGYWEQRLQIERVERVKQIKEHWESQCRAFVGV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00167 325 ProSitePatterns Zinc finger RING-type signature. 236 245 IPR017907 -
Pral3722g00167 325 SUPERFAMILY RING/U-box 214 271 - -
Pral3722g00167 325 CDD RING-HC_BAH1-like 211 284 - -
Pral3722g00167 325 ProSiteProfiles SPX domain profile. 1 151 IPR004331 -
Pral3722g00167 325 Pfam Zinc finger, C3HC4 type (RING finger) 218 270 - -
Pral3722g00167 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 323 IPR013083 -
Pral3722g00167 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 324 IPR033326 -
Pral3722g00167 325 SMART ring_2 221 269 IPR001841 -
Pral3722g00167 325 ProSiteProfiles Zinc finger RING-type profile. 221 270 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00167 Pral-Chr3722 694936 698133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00167 218 270 C3H Transcription Factor Family AT4G28270 41.379 2.52e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00167 K16275 - qsa:O6P43_010771 522.702