Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00166 ATGAAGTTCTGCAAGAAATACGAGGAGTACATGCAAGGCCAGCAGAAGCAACTTCCGGGAGTTGGTATCAAAAAGCTCAAGAAGATAATGAAAAAATGCAGCGGAGACTGCCGATCCCGCAAAGGCCTCAATGAGGCCATTGGCGTCCGAACCTGCAGCGACCAGTGCCCAGTAGTAGGTTGCTTTAATGAGCGTGCCCAAAATTTGTTAAAGCTCCATCTCGCTTCTGGCTTCAGAAAGTCCTTTTTCTGGTTCAAAGGCAAATTACGTGGAAAACAAACTGCCCTCGTTCAAGAAGGCAAAGACCTGGTTATTTATGCGCTAATTAATGCCATTGCAATCAGAAAGATACTCAAGAAATATGATAAGATTCATTATTCAAAGCAAGGACAATTATTCAAGTCACGAGCACAGAGTATGCACATAGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTCATGGCCTTCCACATCAATTTAAGGGAAAGCAAGAACAAGTCAATGAAGAAGCCACCTGCTTTCTTTCATACATGTTCCCTCACATTTAAGGATGATAAACCATCACTTACTTGTGAGCCATTTGATTCCATCAAACTTGATATTGACTTGACGTGTTCTATATGCTTGGACACTGTATTTGATCCAGTTTGTCTTACTTGTGGCCACATATTCTGCTACATGTGTGCTTGCTCATCTGCATCAGTAACTATTGTTGACGGAGTTAAAGCAGCAAATTCTAATGCAAAATGTCCACTGTGCCGAGTGGGAGGAGTCTATCAAGGTGCTGTGCACTTGGAAGAATTAAATATTCTGTTAGGCCGAAGCTGCAAGGGATACTGGGAACAAAGGCTTCAGATAGAGAGGGTTGAGAGAGTTAAGCAAATAAAAGAGCATTGGGAATCGCAGTGCAGGGCATTTGTGGGCGTCTAA 930 0.429 MKFCKKYEEYMQGQQKQLPGVGIKKLKKIMKKCSGDCRSRKGLNEAIGVRTCSDQCPVVGCFNERAQNLLKLHLASGFRKSFFWFKGKLRGKQTALVQEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSRAQSMHIEILQSPWLCELMAFHINLRESKNKSMKKPPAFFHTCSLTFKDDKPSLTCEPFDSIKLDIDLTCSICLDTVFDPVCLTCGHIFCYMCACSSASVTIVDGVKAANSNAKCPLCRVGGVYQGAVHLEELNILLGRSCKGYWEQRLQIERVERVKQIKEHWESQCRAFVGV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00166 309 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 56 308 IPR033326 -
Pral3722g00166 309 ProSitePatterns Zinc finger RING-type signature. 220 229 IPR017907 -
Pral3722g00166 309 Pfam Zinc finger, C3HC4 type (RING finger) 202 254 - -
Pral3722g00166 309 CDD RING-HC_BAH1-like 195 268 - -
Pral3722g00166 309 SUPERFAMILY RING/U-box 198 255 - -
Pral3722g00166 309 ProSiteProfiles SPX domain profile. 1 135 IPR004331 -
Pral3722g00166 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 307 IPR013083 -
Pral3722g00166 309 SMART ring_2 205 253 IPR001841 -
Pral3722g00166 309 ProSiteProfiles Zinc finger RING-type profile. 205 254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00166 Pral-Chr3722 694936 698133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00166 202 254 C3H Transcription Factor Family AT4G28270 41.379 2.57e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00166 K16275 - qsa:O6P43_010771 486.108