Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00157 ATGGTCGAAACCAGACGGGGCTCGTCGACTTCCAAGCGCTCTCTCTCTTCATCCTCCTCTTCCAACGTCAAACGACCCAAGGTGCCCAAGGCTTCTTCGTCAAGAAGTCCGCCGTCAGCGGAATTTCTTGGTCCTGTCAACGAACCTGGAAATGAATCCCGAGAGACGGAGCCAAGTCCGTCTAATCTTCCAGATACTGATTCGTTGAAAGGCATGGAGGATTGTGACGTGACGATATCTGACCAATCTCCCGCCATGGCCATCATCGAAGGCGAGGATTTGACATGGCCGCCGCCTCTGGGTGAAACCGCGGTGGATGGAGAGAAATCAAAGTTGGTTGGAGCGGCCGCCGATGCCCGGTCCAAGAAACGCCCAACGAAATCAACTAAAACGAGCCCGAAGGCTGCGTGGGGAAGGCTTCTTTCTCAGTGTTCGCAGAATCGACATTTGTCCTTGTGCAGTTCTCAATTCACTGTTGGTCATGGCCGTCAATGCAATTTATGGCTTAATGATCCAGCTGTCAGTAATGTTTTGTGCAAGCTGAAGCTCACCAAGCATGGAGGTTCGTCTGTTGGATTACTGGAAATCACAGGGGATAAAGGTGCCGTCCAAGTTAATGGCAGGAATTACAAAAAAAATTCCTGCCTGATCCTGAACGCAGGTGATGAGGTGGTCTTCAATTCTGACAAGAATGCTTATATATTTCAGCAGCTCACGAATAATAATGTCACTACTGCTGGGGTACCTTGTTCTCCTCCTGGCCATGGGGTTGATACTGCTGACAAGGAGAATACCACCAATAATGGCAATCCAGCTGAAGTTTCTGCTGATAAAACTATTTATGCATCCTCTGCCGCTGCCAATGAAAATTGTAATCTTGACAGCATGAAAGTGGAGGATGGGATGTTGACAGGGGCCCCTCATGAGTTAAGGCCTTTGTTGTGCAAGCTTGCTGGCCTGTGCACTGAATTCAACTTGAATGATGGATTTTCCAAAATATCTGAACAAGGAGAATCAGTAGAACTCTTCAAGGATGTTGATCCTCAAACTAAATTAGTTTCCATCAGGCAGCAAGCATTCAAAAACATCTTACAACAAGGAATTCTCAATCCTGATAATATTGATGTGTCATTTGAAAACTTCCCATATTATATAAGTGATGCTACAAAAAGTGTTTTGATTACTTCTATGTACATTCACTTGAAGCGAAATGGTTTCACAAAGTCTGCTTCAAGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTGCAGGTTCGGAAATTTATCAGGAAACCTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCTAGGCTATTGATTGTGGATTCTTTTACCCTACCTGGTGGAACACCGTCAAAGGATTCTGATTCTATTAAACAAGGTTTAAAGCCTGCAAAAGCGTATGTGCTTGCAAAACACGCAGCGCAGATTGCCAAATTACAGCATAAGAAACCAACTTCAAGTGTCGATGCTGATCTTATCAATGGATCCTCGTTAAGTTCTCAGGTTAAGCTGAAGCAGGAGGTATCTACTGCATCATCCAAAGGTCCTATGCTTAAAACAGGTGACCGAGTAAAATTTGTTGGTAACCTTCCCTCTGCAGTCTCATTATTACAAAATTATCCTTCTAGGGGACCTAGGTATGGCTCCCGGGGCAAAGTTCTTCTTGCTTTTGAAGAAAATGAATCTTCAAAAATTGGGGTTAGATTCGACAAACCAATTCCAGATGGAAATGATCTTGGAGGCCTATGTGAAGATGATCGTGGTTTTTTTTGTTCTGCTAATCATTTGCTACGGGTAGATAGCTCTGGAGGGGATGACACTAACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTTTTTGATCAGAGTAGAAGTGGTGGGTTGGTGTTGTTCTTGAAGGATATAGAGAAGGCTGTGATTGGGAACTTAGAAGTCTTAAAAAGCAGGCTTGAAAGTTTGCCACGAAATGTAGTTGTAATTGGCTCACATACTCAGCTGGACAATCATAAGGACAAGACGCAGCCTGGTAGCCTTCTGTTCACAAAATTTGGGAGTGCTCAGGCAGCATTGCTTGATCTTGCTTTCCCGGATAACTTTAGCAGATTGCATGATAGGAGCAAGGAAAACCCAAAAGTGATGAAGCAACTTGGCCGCCTTTTCCCCAACAAAGTATCAATACAGCCGCCTCAGGATGAGGGCTTGCTTTCTTATTGGAAGCAGCAATTAGAACATGACATTGAAACTATGAAAGCTCAATCAAATATTGTCAGCATTCGCACAGTTCTCGACAAGATTGGATTTATTTGCCCTGATCTTGAAAATCTTTGCATTAAAGATCAAGCACTACCACCTGACAGTGTGGAGAAAGTTGTTGGCTGGGCATTAAGTTACCAGCTAATGCATTCATCTGAAGATTTAACTGAAGATTGTAAGATTGTGTTGTCTACTGAAAGCATTAAGTATGGGCTGAATATTCTACAGGACATACAAGGAGCAAGTAAGAACTTAAAGAAATCACTGAAGGATGTGATTACTGAGAATGAATTTGAGAAAAAATTGCTAGCTGATGTTATTCCTCCACGTGATATTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACGCCTTAAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGTGTTGGAAAAACAATGCTCGCAAAGGCTGTAGCTACTGAGGCTGGAGCGAATTTCATCAACATCTCAATGTCCAGCATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTATTTTCTCTGGCAAGCAAAATTGCTCCGAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTGAATTGGGATGGTCTATGCACAAAAGACAATGAGCGCATACTAGTACTTGCTGCTACAAATAGACCTTTTGATCTTGATGATGCTGTTATTAGGAGGCTTCCACGGAGATTGATGGTCAGTTTGCCAGACGCTCCGAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAAAGAAGATTTGGCACCTGATGTCGATTTGGAGGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTCTGTGTCGCAGCAGCTCACTGTCCAATAAGAGAGATATTGAAGAAGGAAAAGAAGGAGAGAAGTTTGGCGCTGGCTGAGAGCAGACCTTTACCTCCATTGTATGGCAGTACTGACATTCGGCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGGTGTGCGCAAGCGTGTCGTCAGAGTCAGCAAATATGAACGAGCTGCTCCAATGGAATGAGCTCTACGGGGAAGGTGGATCCAGAAAAACGAGATCGTTGAGCTATTTTATGTAA 3543 0.4324 MVETRRGSSTSKRSLSSSSSSNVKRPKVPKASSSRSPPSAEFLGPVNEPGNESRETEPSPSNLPDTDSLKGMEDCDVTISDQSPAMAIIEGEDLTWPPPLGETAVDGEKSKLVGAAADARSKKRPTKSTKTSPKAAWGRLLSQCSQNRHLSLCSSQFTVGHGRQCNLWLNDPAVSNVLCKLKLTKHGGSSVGLLEITGDKGAVQVNGRNYKKNSCLILNAGDEVVFNSDKNAYIFQQLTNNNVTTAGVPCSPPGHGVDTADKENTTNNGNPAEVSADKTIYASSAAANENCNLDSMKVEDGMLTGAPHELRPLLCKLAGLCTEFNLNDGFSKISEQGESVELFKDVDPQTKLVSIRQQAFKNILQQGILNPDNIDVSFENFPYYISDATKSVLITSMYIHLKRNGFTKSASSLPSLCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSFTLPGGTPSKDSDSIKQGLKPAKAYVLAKHAAQIAKLQHKKPTSSVDADLINGSSLSSQVKLKQEVSTASSKGPMLKTGDRVKFVGNLPSAVSLLQNYPSRGPRYGSRGKVLLAFEENESSKIGVRFDKPIPDGNDLGGLCEDDRGFFCSANHLLRVDSSGGDDTNKLAINEIFEVVFDQSRSGGLVLFLKDIEKAVIGNLEVLKSRLESLPRNVVVIGSHTQLDNHKDKTQPGSLLFTKFGSAQAALLDLAFPDNFSRLHDRSKENPKVMKQLGRLFPNKVSIQPPQDEGLLSYWKQQLEHDIETMKAQSNIVSIRTVLDKIGFICPDLENLCIKDQALPPDSVEKVVGWALSYQLMHSSEDLTEDCKIVLSTESIKYGLNILQDIQGASKNLKKSLKDVITENEFEKKLLADVIPPRDIGVKFDDIGALENVKDALNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLCTKDNERILVLAATNRPFDLDDAVIRRLPRRLMVSLPDAPNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVAAAHCPIREILKKEKKERSLALAESRPLPPLYGSTDIRPLKMEDFRYAHEQVCASVSSESANMNELLQWNELYGEGGSRKTRSLSYFM 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00157 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 875 1152 IPR027417 -
Pral3722g00157 1180 SUPERFAMILY SMAD/FHA domain 137 235 IPR008984 GO:0005515
Pral3722g00157 1180 ProSitePatterns AAA-protein family signature. 1019 1038 IPR003960 GO:0005524|GO:0016887
Pral3722g00157 1180 Gene3D - 874 1154 IPR027417 -
Pral3722g00157 1180 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 874 1050 - -
Pral3722g00157 1180 Pfam ATPase family associated with various cellular activities (AAA) 916 1045 IPR003959 GO:0005524|GO:0016887
Pral3722g00157 1180 SMART AAA_5 912 1049 IPR003593 GO:0016887
Pral3722g00157 1180 MobiDBLite consensus disorder prediction 114 134 - -
Pral3722g00157 1180 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 358 1179 - -
Pral3722g00157 1180 Gene3D - 1048 1142 - -
Pral3722g00157 1180 Gene3D - 517 619 IPR047008 -
Pral3722g00157 1180 MobiDBLite consensus disorder prediction 52 66 - -
Pral3722g00157 1180 Pfam AAA+ lid domain 1069 1105 IPR041569 -
Pral3722g00157 1180 Gene3D - 136 245 - -
Pral3722g00157 1180 MobiDBLite consensus disorder prediction 1 72 - -
Pral3722g00157 1180 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00157 Pral-Chr3722 642964 653670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00157 911 1117 Calmodulin-binding Proteins AT3G56690 35.071 1.03e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00157 - - tcc:18613539 1456.43