Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00143 ATGAGTTATATCTCAGAGAGAGAAGGCTTTAATAAGTACAACTTCAGCAACACAGATTCTCATCATCATCAAGACGGGGGAATCATCAAGGAGCAAGATCGCTTGCTTCCAATAGCTAATGTGGGGAGGATTATGAAGCAAATTCTGCCTCCTAACGCCAAAATCTCCAAAGAAGCCAAGGAAACCATGCAAGAATGTGTTTCTGAGTTCATAAGCTTCGTCACTGGGGAGGCCTCTGACAAGTGTCACAAGGAGAAGCGCAAGACAGTGAATGGCGACGATATTTGCTGGGCCCTCTCTACTCTAGGGTTTGACGACTACGCCGAGCCACTCAAGAGGTATTTGCTTAAGTTTAGGGAATCAGAGGGCGAGAGATCTAACCAAAATAAGGCCAACAATTTTCACACTGATGAAATTGATGTTGCTGATCAAGCTTGTGAATATGGAGGTGAGCCTCCCAGGAGAGCCCCCACTACTAGTGCTTCCTCTGCTACGGGTACCTCATTGATGAGGTTCAATGGCACCTCTCACTCACACCAGTTTCCAAACTTCTAG 555 0.4613 MSYISEREGFNKYNFSNTDSHHHQDGGIIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSTLGFDDYAEPLKRYLLKFRESEGERSNQNKANNFHTDEIDVADQACEYGGEPPRRAPTTSASSATGTSLMRFNGTSHSHQFPNF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00143 184 ProSitePatterns NF-YB/HAP3 subunit signature. 66 82 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pral3722g00143 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 35 99 IPR003958 -
Pral3722g00143 184 Gene3D Histone, subunit A 25 148 IPR009072 GO:0046982
Pral3722g00143 184 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 140 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pral3722g00143 184 MobiDBLite consensus disorder prediction 156 184 - -
Pral3722g00143 184 FunFam Nuclear transcription factor Y subunit B-3 24 147 - -
Pral3722g00143 184 PRINTS CCAAT-binding transcription factor subunit A signature 82 100 - -
Pral3722g00143 184 PRINTS CCAAT-binding transcription factor subunit A signature 63 81 - -
Pral3722g00143 184 PRINTS CCAAT-binding transcription factor subunit A signature 101 119 - -
Pral3722g00143 184 MobiDBLite consensus disorder prediction 147 184 - -
Pral3722g00143 184 SUPERFAMILY Histone-fold 32 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00143 Pral-Chr3722 597589 598634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00143 10 127 CCAAT-HAP3 Transcription Factor Family AT2G47810 66.917 2.55e-60 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral3722g00143 CBFD_NFYB_HMF 1.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00143 K08065 - fve:101303182 219.164