Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00142 ATGTCAAATATTTCAGGTGATGAAGCAGGTTTGTCCCCAGGGGAACACGTCCAATATGAGGAAAGCCAGAACCAACAGCAACAAGACAACCACTTGCATGGCTCAAGCTCAAGACCTTATTACCACAACCATAATGCCTCAAATGATTATCAACATCATCCTCAATCAGCCAAGAAGAAGCGAAATCTCCCTGGAACTCCAGGCAAATTCAACTCTAAATTAGATCCGAATGCCGAAGTGATTGCTTTGTCACCTACGACACTGATGGCAACGAACAGATTCGTGTGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAGAACCTGCAGTTGCACAGGAGAGGTCACAATCTGCCATGGAAACTGAGACAGAGACCGAGCAATGAAGTGAGCAAGAAGCGAGTTTACGTGTGTCCAGAGCCTTCGTGCGTCCACCATGGCCCAGCTCGAGCACTTGGAGACCTCACTGGCATCAAAAAGCACTTTAGCCGCAAACACGGCGAGAAGAAATGGAAATGCGACAAATGCTCCAAAAAATACGCCGTCCAATCTGATCGGAAAGCCCACCAGAAAACCTGCGGCACCCGCGAATACAAGTGCGATTGTGGCACCATATTTTCCAGGAGAGATAGTTTCGTCACTCACAGGGCATTTTGTGATGCGTTGACTGAAGAAAATAACAGGGCGAACCAGGGATTAACCAGTGCAAAATCTGCAGTATCTCTAAACACTCATTCCAACGAAGCATCTGAGTTAAACACAATGGCTCCTCAGGGAATCGTTCCTGTGTCATTGAAGTGGGGAGGCCTGTTCACCACCGCTTCAGGTGCACTTGTCGGTGGTCTTAAGGGCTTGCCCCCTCCTTCGTCCAGCTCCTCTGTTTTTGATTCCATCCAAGAGGGCCAAAAAGGTTCAGAGTCAGCCCACGCGTCTGCAACGGCTTTACTACAGAGAGCAGCTCAAATGGGTGCCACCGCAAGTAATAATAGCAATAACTCTCCCATGGTTCATAAAGGGTATGTTACTTCCATGGCAGGCCCTGATTACCACCCTCAACCAAACCTGGCTGGGATTGGTGGAGGTGGGGAATTCAGCAACCTCTTGTTCCAGAAAGGTGGGCAAGAAATGTCGCAATCGTTTGACTCTTACAATGCATCTGGTTTGAATGATATGGAAATGTTGAGCCAAATGGTGATGGGAGGAAGACATGGAACAGAAGCAAACTCTGAGGAGCTCGAAAGGAATGGAGGAGCAAGTGAGATGACCAGAGTCCACGACTTCTTGGGCGTCGGGGGGCCCCCTCCCATGCCCATTCCGACGAATTTGCACGGGCTTCACAGTAGCTTTGGCTATAACGGAGATTGGAGTTGGAAGCAGTTATGA 1383 0.4888 MSNISGDEAGLSPGEHVQYEESQNQQQQDNHLHGSSSRPYYHNHNASNDYQHHPQSAKKKRNLPGTPGKFNSKLDPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRPSNEVSKKRVYVCPEPSCVHHGPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDRKAHQKTCGTREYKCDCGTIFSRRDSFVTHRAFCDALTEENNRANQGLTSAKSAVSLNTHSNEASELNTMAPQGIVPVSLKWGGLFTTASGALVGGLKGLPPPSSSSSVFDSIQEGQKGSESAHASATALLQRAAQMGATASNNSNNSPMVHKGYVTSMAGPDYHPQPNLAGIGGGGEFSNLLFQKGGQEMSQSFDSYNASGLNDMEMLSQMVMGGRHGTEANSEELERNGGASEMTRVHDFLGVGGPPPMPIPTNLHGLHSSFGYNGDWSWKQL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00142 460 MobiDBLite consensus disorder prediction 1 74 - -
Pral3722g00142 460 FunFam protein indeterminate-domain 12-like 73 142 - -
Pral3722g00142 460 Gene3D Classic Zinc Finger 72 140 - -
Pral3722g00142 460 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Pral3722g00142 460 Gene3D Classic Zinc Finger 150 230 - -
Pral3722g00142 460 FunFam protein indeterminate-domain 5, chloroplastic-like 149 228 - -
Pral3722g00142 460 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 36 436 IPR031140 -
Pral3722g00142 460 SMART c2h2final6 94 116 IPR013087 -
Pral3722g00142 460 SMART c2h2final6 171 191 IPR013087 -
Pral3722g00142 460 SMART c2h2final6 136 166 IPR013087 -
Pral3722g00142 460 MobiDBLite consensus disorder prediction 17 52 - -
Pral3722g00142 460 MobiDBLite consensus disorder prediction 286 311 - -
Pral3722g00142 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 116 IPR013087 -
Pral3722g00142 460 SUPERFAMILY beta-beta-alpha zinc fingers 93 192 IPR036236 -
Pral3722g00142 460 Pfam Zinc finger, C2H2 type 94 116 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00142 Pral-Chr3722 587643 589790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00142 56 330 IDZ Gene Family AT3G50700 55.556 5.96e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral3722g00142 zf-C2H2 0.0046 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00142 - - gmx:100782774 462.996