Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00138 ATGGAGGTCTTGAAAGACGAATTTTCGGAGCTAGAGATTGGGAATTCAGTGGAGTCATTCCAGAAATTTCTGGTTTCGCAAAGGGAGCTCTTTCATAGCCAGATCGATCAGCTTCAGAAAATCGTCGTTACGCAATGCAAACTCACTGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGGAAGAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAACTACATGCAGTTAGTATTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGCGTCACAGTGACACAGGTTCGCGAATTTTTCAATAGTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTATCAAGGGAAAGAGTGTTAAGATCTAACTACTGTGAAGAACCTCGTGATGGGTTCACAACTAACTCTGGTTCTATGATGCCAATTAATCCAGCTCCCTTAAACTCTGCTGGTCCTATCAGCGTAGATGAAGCTTCTTGTTCAACACAGGAGACTTCATTTTCTGGCTTAAATGGCTCAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACATTTTCAGGCCAGGTGAAATTGTTGGAGTGGATATTGAAGATACCGAATGCTTCAGTATTAATTTGGTTTTTAGGTTGTGGAGGTGTGATGATATTAGCAGCTTGGTTGAATGAAGCAGCTGTTGAAGAGCAAACGAGTGTTCTTCTTCTTATTTTAAAGGTCCTTTGTCATTTGCCTCTACACAAAGCCCTTCCTACGCATATTTCAGCTATATTGCAGTGTGTTAATAGACTTCGGTTTCACAGAACGTCAGACATATCAAACAGGGCGCGGGTTTTGTTATCTAACTGGAGTAAATTATTAGCGAAGAACCAAGCAATAAAGAAAACCACTGGTGTGAAACCTGGTAGTGAGGCTCAAAAGGAGATGGTTGGTCAGAGGGTTTGTCAAATTATGGGCACTGAATCATGGAACTCAAATGTCGATATTCCTGAGGACATTCTTTCCCTTTCAAATGAAGGTTCAGATGATCTCAGGAAATCAGAAGCGCCGCAGAGTGTGAAATTATTGACAGCTTCTTCTGATGATTCTACTAAGAAGTCTGTCCTAGGCCTATCACTGTCTCAGACTAGGGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGCCAAAAGACAGTGAGCAGAAGTCCTCAAGCTGTAAGGGCAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGAAAAGCAAATACGGGAAACCTGGTTCATCTAAAGGAAGTAAGGAAGCAAAGACTGATGGTCTGAACAAACCTCAGACAAATCGGGCTGGTCTTGGGGCTTCCTCATGTAAAGTTCCTGTATCAACCAAAACTGATGAAGGCAGCAAACTTCTGTTGCTTCCTTCTAAAACTTCTAATATGAAGGATGCTTCTTCTGAATCATACTCAAGAATGGATTTGAAGGAACCTTTCTGGGAGAAGTGCAAGCAGGTGCAAATCCCATGGAAGACACCAGCAGAAGTGAAACTTAACGATACCTGGAGAGTTGGTGCTGGTGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGGGGAGAAGAGATAATTTATCAGACTATCCAGGAGATACCGCTTAATCCCAACGAGCCATGGGACCTCGAAATGGACTATGATGACACGTTGACCCCATCAATTCCTATTGAGCAGCTACCTGATGTTGAGGGTGCAGAAGCACCAGCTCCTGCTAATGAAGGTATTCAAGTGGCGAACCCTTCATCTTCCAACGCTAATGTAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCCGAGTTGGTGTTTGCACTGACTTCTGGACAAGCTGGTAGTATACCGAGTGAGGAAACGGTAAAGCTGCTTGACATGATCAAAAAAGGTAGCGTCCATTTGGCTGACAATACAAATGGCAGCATTGGTGGAAAGGCGCAGGAGAAGGCGGAAGTTTCTCTTCCTTCTCCAACTCCTTCTAACGATCCAAGAACGAGTGGGTGGACGACAGAAGCTACAAAGAATCCTTTTTCACGCCACAACACGGCGCCTGACAGAAGCATCAGCTTTCCAGCAGCTGCAACCAACGCCATTGTATTGCCTCAGGTTCCAGCAGCCCCTGGCTTGGCAGTACGACAACATCGAACTGATTCACTGTCTCAAGCGCCTAATGTTGTTTCTGCTCTTCCCTCTGTGCATCCAACTCTGCTTACCAATTCTCCAACCCAAATGCTATCATCGAACATAGGTTTAAGTACCATGATGAACGACGTAATACCTGCGAATGCATCGTCTGTTAACTTATCCACTGCACACTCACCTTTAGCTATGCGGGTAGATAGCACCGGTATCAGTAGTAATGTAAAACCAATAGCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATCTTCAATCTTATGACCTGCCATCACCAACTCCGACACCATCACCAACACCAAGTTCAGTCACACCCCCACAGGGGCATGCCCATTTATTGCAGCCGCCCCATTTTTATGAACCTTCCTCTCACAACGCTCTACATTCCTACCCTCCTCCTATGGAGAAACAAGGTCATGTTTCAGAGTCTTGGAGACTTAGACAGGATATATCCTCCAGTTATCATTCTCAAGTAAATCAAAACACTTATAACGCGTCAGTTGAAAGACCCAAGCGATCCGGTTATTCGTGGGAGAGAAATGATTATGGAGGAGGAGGAGGAGGAGAATTTGAATCATGGAGTCCAGATAATAGTCCAAGTAGAAATAATGGGTATATCAGAGGGAGGAGTTTACCTGATTCCAGAATGAACCCGGGGAGTAACTATAGGCCTGAATGGTCAAGACATCGGGGTTCTTCTGGTTACTGGGATCCCAGTAGACAAGGAAGCAGGAAGTGGCACGATCAGAGGTGA 3060 0.4402 MEVLKDEFSELEIGNSVESFQKFLVSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGVTVTQVREFFNSQRSRVRRQVRLSRERVLRSNYCEEPRDGFTTNSGSMMPINPAPLNSAGPISVDEASCSTQETSFSGLNGSEKHFVDNIFSLMRKEETFSGQVKLLEWILKIPNASVLIWFLGCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFHRTSDISNRARVLLSNWSKLLAKNQAIKKTTGVKPGSEAQKEMVGQRVCQIMGTESWNSNVDIPEDILSLSNEGSDDLRKSEAPQSVKLLTASSDDSTKKSVLGLSLSQTRERRKVQLVEQPGQKTVSRSPQAVRAGPVSQGRPMSADDIQKAKMRALFMKSKYGKPGSSKGSKEAKTDGLNKPQTNRAGLGASSCKVPVSTKTDEGSKLLLLPSKTSNMKDASSESYSRMDLKEPFWEKCKQVQIPWKTPAEVKLNDTWRVGAGENSKEVDVQKSRNRRGEEIIYQTIQEIPLNPNEPWDLEMDYDDTLTPSIPIEQLPDVEGAEAPAPANEGIQVANPSSSNANVNVAEPDLELLAVLLKNPELVFALTSGQAGSIPSEETVKLLDMIKKGSVHLADNTNGSIGGKAQEKAEVSLPSPTPSNDPRTSGWTTEATKNPFSRHNTAPDRSISFPAAATNAIVLPQVPAAPGLAVRQHRTDSLSQAPNVVSALPSVHPTLLTNSPTQMLSSNIGLSTMMNDVIPANASSVNLSTAHSPLAMRVDSTGISSNVKPIANLRIQEGLSNSHLQSYDLPSPTPTPSPTPSSVTPPQGHAHLLQPPHFYEPSSHNALHSYPPPMEKQGHVSESWRLRQDISSSYHSQVNQNTYNASVERPKRSGYSWERNDYGGGGGGEFESWSPDNSPSRNNGYIRGRSLPDSRMNPGSNYRPEWSRHRGSSGYWDPSRQGSRKWHDQR 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00138 1019 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1002 - -
Pral3722g00138 1019 SMART HOX_1 68 130 IPR001356 GO:0003677
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 962 976 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 400 431 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 464 485 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 701 734 - -
Pral3722g00138 1019 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 229 314 IPR035441 -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 683 734 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 446 485 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 924 938 - -
Pral3722g00138 1019 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Pral3722g00138 1019 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 924 1019 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 852 911 - -
Pral3722g00138 1019 MobiDBLite consensus disorder prediction 406 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00138 Pral-Chr3722 570557 580325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00138 1 729 Homeobox Transcription Factor Family AT4G02560 51.136 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00138 - - gmx:100806633 1170.61