Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00086 ATGAATGAGAAGGTAGATTCTCCCGTTGGAGTTCTGGAGGAATATTTTGGAAGTCCAGAGTCAGAAACTAGTGGCTCCTATTCCAAAGAACCCACGGTGGGTTCTGGCTCTGAAGACGATAAGTCAACACCTGCTTCTAGATGGCCCGGTTTCCTTCAGTCGTTGGGGACCAGATCAAAGAAACCTATAGCCCCATTGCATTTTCTGAGTGTTCTCAAGCTCTCCAGGAGATTCAGTCGTGGCACAAGGGAGACTACACTGCCAAATCATTACATTGATGCAGATTCATCCCCCCACAGATTACCATGCAAGATCTTCTCCTACCATGACATTCAAATGGCAACCAATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGAGGTTATGCTGAAGTTTACAAAGGGTGTTTGCGAAATGGTCAACTGGTGGCAATTAAACGGCTAACTCGAGGAACCCCAGATGAGATCATAGGGGACTTTTTATCAGAACTGGGCATAATGGCGCATGTGAACCATCCCAATACTTCTAAGTTGGTTGGCTATGGAGTGGAAGGAGGAATGCATCTTGTCCTCGAATTGTCCGAAAAGGGGAGCTTAACTTCGTTGCTTTATGGTTCGAAGGAGAAACTACCATGGTGCGCAAGGCACAAAATTGCGTTGGGAACGGCTAAAGGTATACTTTATCTTCACGAGGGTTGTCATAGGAGAATTATCCACAGGGATATAAAGGCTGCAAATATCTTGCTTATGAAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTGGCAAAATGGCTACCGGAGAATTGGACTCATCACACCGTTTCAAAATTTGAAGGGACTTTTGGCTACCTTGCTCCAGAATACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATATGCCTTCGGTGTATTGCTTTTGGAATTGGTCACTGGGCGGCGAGCACTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAGACCATTGCTGAAAAAGAATGATATTAGGGAGTTGGTTGACCCTTCACTAGGCCAAGACTATGACTGTCGTCAGATTCATTTGGCGCTCTTGGTAGTCTCTTTGTGCATCCAACAATCCGCAATTCGTCGGCCCTCCATGAGACAGGTTGTGCAGCTTCTGAGCGGCAACCTTAGCGGCTGCAAGCACATGAAGAAGACTCGACTTTCGTTTGTTCGTAAAGTCCTGGAGGAAGAGCTCCTCCATTCTGAGTAG 1242 0.4565 MNEKVDSPVGVLEEYFGSPESETSGSYSKEPTVGSGSEDDKSTPASRWPGFLQSLGTRSKKPIAPLHFLSVLKLSRRFSRGTRETTLPNHYIDADSSPHRLPCKIFSYHDIQMATNHFSQKNLIGKGGYAEVYKGCLRNGQLVAIKRLTRGTPDEIIGDFLSELGIMAHVNHPNTSKLVGYGVEGGMHLVLELSEKGSLTSLLYGSKEKLPWCARHKIALGTAKGILYLHEGCHRRIIHRDIKAANILLMKDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNDIRELVDPSLGQDYDCRQIHLALLVVSLCIQQSAIRRPSMRQVVQLLSGNLSGCKHMKKTRLSFVRKVLEEELLHSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00086 413 ProSiteProfiles Protein kinase domain profile. 118 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3722g00086 413 Gene3D Transferase(Phosphotransferase) domain 1 195 404 - -
Pral3722g00086 413 MobiDBLite consensus disorder prediction 1 51 - -
Pral3722g00086 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3722g00086 413 SMART serkin_6 118 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3722g00086 413 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
Pral3722g00086 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Pral3722g00086 413 SUPERFAMILY Protein kinase-like (PK-like) 98 383 IPR011009 -
Pral3722g00086 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Pral3722g00086 413 PANTHER OS08G0249100 PROTEIN 6 397 IPR046958 -
Pral3722g00086 413 Gene3D Phosphorylase Kinase; domain 1 91 192 - -
Pral3722g00086 413 MobiDBLite consensus disorder prediction 19 51 - -
Pral3722g00086 413 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 89 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00086 Pral-Chr3722 415239 417990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00086 106 385 Receptor kinase-like Gene Family AT1G53420 42.708 1.34e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral3722g00086 Pkinase 4.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00086 - - gmx:100780587 617.076