Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00061 ATGGCTGCGCCTCTCACAGCCAGGCTTCAAACTCTCCTGCAAGCCACGGTGCAATCGGTTCAGTGGACTTATAGTCTCTTCTGGCAACCCTGTCCCCAACAAGGGATCCTGGTGTGGGCGGATGGTTACTACAATGGGGCAATTAAGACCCGGAAAACTGTGCAGCCAGTGGAAGTTAGTGCCGAGGAAGCGTCTCTTCAAAGAAGCCAGCAACTTAGGGAGCTCTACGAATCATTGTCTGCCGGGGAGACCAACCCTCCGGCTCGACGGCCTTGTGCTGCCTTGTCGCCCGAGGACCTAACCGAATCCGAATGGTTTTATCTGATGTGTGTCTCTTTCTCCTTTCCTCCTGGCGTCGGGCTACCGGGGAAAGCATATGCGAGGAGGCAGCACGTATGGCTTGCCGGTGCAAACGAGGTGGACAGCAAAACGTTTTCAAGAGCTATTCTTGCCAAGAGTGCTCGCATACAGACCGTGGTGTGCATACCTCTGTTGGACGGCGTCGTAGAGTTGGGCACAACAGATAAGGTTCTGGAAGACCTTAATTTTATCCAACACGTGAAAAGCTTCTTCACAGATCACCAGCGGCAGCACCACCCTCCACCGCCAAAGCCCGCCCTCTCCGAGCACTCGACCTCCAACCCCACCGCCTCTTCCGACCACTCCCGTTTCCAGTCCACTCCAGTCGCGGTTGCCATGTATTCCGCCGTGGACCCATCACCCGCCACCCCACCCGCTCCTAACAACCACATGAATGAAGATGACGAGGAGGAGGATGACGAAGAGGGCGAGTCCGACTCGGAGGCAGAAACGGCCCGGAACTGCCACCCAACGTCTACCCCAGAGGCGTCTGGCGTGGCAGCTGCCACTGCAGCAGAACCAAGCGAGTTAATGCAGCTGGAGATGTCGGAAGATATCCGAGTAGGATCACCGGACGATGGTTCCAACAATCTGGACTCAGATTTCCATCTGCTGGCGGTGAGCCACCCAGCCGATCAGGAGCGCCGAGCTGAGTCGTACCGGGCCGAGTCGACCCGGAGGTGGGTCGAACCAGGGCTTCAACAACCAGTTTCAGAAGGCGCTCAGCTAGAAGACCTCACAAAAGAGGACACCCACTACTCTCAGACAGTGTCCACCATCCTCCATAATCAGTCTCTCCGGTGGGCCGAATCACCCCCCGCCGACTACATAGCCTGCTCCTCTCAGTCGGCTTTTGCCAAGTGGAACACCCGTGCCGACCACCACCTCCTCCACCTGTCCGCCGACGGCACCTCTCAGTGGCTCCTCAAGTACATTTTGTTCACCGTCCCTTTCCTCCACACCAAGTACCAAGACGACAACTCGCCCACCCCCCGAGATGGCACCGATCCCGTCACGCGCCTCCGTGGAAAGGGAACGCCGCAGGACGAGCTGAGCGCCAACCACGTACTGGCCGAGCGACGCCGCCGCGAGAAGCTCAACGAGAGGTTCATCATACTGAGATCGCTCGTGCCCTTCGTCACCAAAATGGACAAGGCGTCCATATTAGGGGACACCATCGAGTACGTGAAACAGTTGCGTAAAAAGATCCAAGATCTGGAGACGCGGAACCGCCAGATGGAAGCAGAGCAACAGTCACGTGAGCAACAGAGGAGCTTGACGAGAGTGGGTTCGGACAAGAGGAAGATGAGGATCGTGGAGGGAAGCGGAGGGATGAGGAAGCCGAAGTCAGTGGAGGCGTCACCGCCGCCATCGCCGTCGGGAGTCGTTACGTCGGTGCAAGTGTCGATCATAGAGAGTGACGCGCTGTTGGAATTGGAATGCGAGAACAGGGAGGGATTGTTGCTGGATGTGATGCAGATGCTGAGAGAGATGAGGATAGAGGTGACGACGGTCCAATCGTCGCTGAACAACGGGGTGTTCGTGGCGGAGCTGAGGGCGAAGGTGAAGGAAAGTCCGAACGGAAAGAAGACCAGCATAGTTGAAGTGAAGAGGGCCCTCAACCAAATCATACCCCACAACGATTAA 2007 0.571 MAAPLTARLQTLLQATVQSVQWTYSLFWQPCPQQGILVWADGYYNGAIKTRKTVQPVEVSAEEASLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLAGANEVDSKTFSRAILAKSARIQTVVCIPLLDGVVELGTTDKVLEDLNFIQHVKSFFTDHQRQHHPPPPKPALSEHSTSNPTASSDHSRFQSTPVAVAMYSAVDPSPATPPAPNNHMNEDDEEEDDEEGESDSEAETARNCHPTSTPEASGVAAATAAEPSELMQLEMSEDIRVGSPDDGSNNLDSDFHLLAVSHPADQERRAESYRAESTRRWVEPGLQQPVSEGAQLEDLTKEDTHYSQTVSTILHNQSLRWAESPPADYIACSSQSAFAKWNTRADHHLLHLSADGTSQWLLKYILFTVPFLHTKYQDDNSPTPRDGTDPVTRLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLETRNRQMEAEQQSREQQRSLTRVGSDKRKMRIVEGSGGMRKPKSVEASPPPSPSGVVTSVQVSIIESDALLELECENREGLLLDVMQMLREMRIEVTTVQSSLNNGVFVAELRAKVKESPNGKKTSIVEVKRALNQIIPHND 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00061 668 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 470 519 IPR011598 GO:0046983
Pral3722g00061 668 MobiDBLite consensus disorder prediction 530 582 - -
Pral3722g00061 668 Gene3D - 594 664 - -
Pral3722g00061 668 MobiDBLite consensus disorder prediction 252 267 - -
Pral3722g00061 668 Gene3D - 471 546 IPR036638 GO:0046983
Pral3722g00061 668 MobiDBLite consensus disorder prediction 209 223 - -
Pral3722g00061 668 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 472 543 IPR036638 GO:0046983
Pral3722g00061 668 MobiDBLite consensus disorder prediction 443 475 - -
Pral3722g00061 668 PANTHER TRANSCRIPTION FACTOR TT8 6 666 - -
Pral3722g00061 668 MobiDBLite consensus disorder prediction 237 291 - -
Pral3722g00061 668 MobiDBLite consensus disorder prediction 546 562 - -
Pral3722g00061 668 Coils Coil 516 543 - -
Pral3722g00061 668 MobiDBLite consensus disorder prediction 192 223 - -
Pral3722g00061 668 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
Pral3722g00061 668 SMART finulus 476 525 IPR011598 GO:0046983
Pral3722g00061 668 Pfam Helix-loop-helix DNA-binding domain 473 520 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00061 Pral-Chr3722 274802 280621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00061 307 667 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 39.891 1.39e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3722g00061 bHLH-MYC_N 3.3e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00061 - - zju:107426439 894.419