LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3722g00026	ATGGAGATTGAAGCGGACATAAGAAGTGGCTCTCTCATTCTGCTGAAGCAAGGAGCTGAAGCCAGGGTTTTTGAGTCTGATTTTGTGGGAAGGAGATCAGTTGTCAAAGAGCGCTTCTCAAAGAAGTACAGGCATCCAATTTTGGATTCTAAACTTACTCTAAAGCGATTAAATGCGGAGGCCAGGTGCACGACCAAAGCAAGACGGCTTGGGGTTTGTACGCCGGTGCTGTATGCTGTGGATCCTGTGTCACACACATTAACGTTTGAATTTATTGAGGGACCTTCAGTGAAAGATGTATTTCTTGAATTTGGGTTACATGGTGTCAATGAAAAGCAGTTGGATGATATTGCATCCCAAATTGGCGATGCAATTGGAAAAATACATGATGGTGGCCTAATTCATGGTGATTTGACCACCTCTAATATGCTGCTGAAGAATGGCACCAATCAGTTGGTCCTCATTGACTTTGGTTTGAGCTTCATTTCAACCCTACCAGAAGATAAAGCTGTTGATTTGTATGTTTTGGAAAGAGCCCTTCTTTCAATGCACTCTTCATGTGGGAATGTGATGGACCGGATACTTGCAGCATATCGCAAATCGTCAAAGCAATGGTCATCCACATTAAACAAGCTGGCGCAAGAGGGAATATCACGTCATGAAGGACCTTTTATTTCGTACGCCAACCGGAGGACAGAAATCACCATGCTTCATGCTGCCAAGCTTGACACGATTGGGTCTGGTTTGATTCTATAA	756	0.4365	MEIEADIRSGSLILLKQGAEARVFESDFVGRRSVVKERFSKKYRHPILDSKLTLKRLNAEARCTTKARRLGVCTPVLYAVDPVSHTLTFEFIEGPSVKDVFLEFGLHGVNEKQLDDIASQIGDAIGKIHDGGLIHGDLTTSNMLLKNGTNQLVLIDFGLSFISTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQEGISRHEGPFISYANRRTEITMLHAAKLDTIGSGLIL	251

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3722g00026	251	FunFam	Protein kinase superfamily protein	107	220	-	-
	Pral3722g00026	251	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	10	214	IPR022495	GO:0004674
	Pral3722g00026	251	SMART	serkin_6	9	225	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3722g00026	251	Gene3D	Phosphorylase Kinase; domain 1	20	92	-	-
	Pral3722g00026	251	NCBIfam	KEOPS complex kinase/ATPase Bud32	18	212	IPR022495	GO:0004674
	Pral3722g00026	251	FunFam	TP53-regulating kinase isoform X1	20	92	-	-
	Pral3722g00026	251	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	133	145	IPR008266	GO:0004672\|GO:0006468
	Pral3722g00026	251	Pfam	Protein kinase domain	55	161	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3722g00026	251	SUPERFAMILY	Protein kinase-like (PK-like)	15	174	IPR011009	-
	Pral3722g00026	251	Gene3D	Transferase(Phosphotransferase) domain 1	106	219	-	-
	Pral3722g00026	251	ProSiteProfiles	Protein kinase domain profile.	9	251	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3722g00026	Pral-Chr3722	148151	152364	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-3	Pral3722g00026		Pkinase	1.9e-10	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3722g00026	K08851		-	jre:109018511	383.259