Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3722g00013 ATGGATTACCCGTATCCAGTGAAAGAAGAGTACTTGGAAGCGACTTCATCTCATTCAGGAGGTGAAGCATCAACAATTCCCCCTCCGCAGCCAATGGAGGGGCTTCATGAGCTGGGGCCGCCACCATTTCTGATCAAGACATTCGACGTGGTGGACGACCCAGCCACCAATTATATGGTTTCTTGGAGCAGAGGGGGCACTAGTTTTGTGGTTTGGGATCCACATGCCTTCTCCATGAGTCTCCTTCCCAGATACTTTAAGCATAACAATTTCTCAAGCTTTGTCAGGCAATTGAACACTTATGGTTTTAGGAAAATTGATCCAGATAGATGGGAGTTTGCAAATGAAGGATTTCTGAGAGGGCACAAGCATCTTTTGAGGAACATAAGGAGAAGGAAGGCACCTGCTAATTTGAGTCTTTCTCAACAAGCACAACAACAAGGTCATTGTGTTGAAGTCGGAAGGTTTGGACTGGACGAAGAAATTGACCGTTTGAGGCGAGACAAGCAGGTGTTAATGATGGAGCTGGTGAGGCTTAGGCAACAGCAACAGAACACTAGATCATATCTTCAGGCAATGGAGCAAAGGTTACAAGGCACGGAAAAAAAGCAGCAACACATGATGGCTTTCTTAGCCAGAGCTATGAAAAATCCAGCCTTTCTCCAGCAACTGCTCCAACAGAAAGACAAGAGAAAGGAGCTTGAAGAAGCCATAACCAAGAAGAGAAGAAGGCCAATTGAGCAAGGACCGAGCTGTGGTGGGGAATCTAGCACTGGTGGTGAAGCAACGTACCCTATTAAAGCTGAGCCTTTAGAATTTAGTAACTATGGGTTTGGAGTGTCAGAATTGGAAGTGTTAGCTATGGAAATGCAGGGTTATGGTAGGGGCAGAAGAGAACAGGAGGCGGCAGAAGGACCACGGGAGAGGCTGGGAAAAGAACTAGATGAGGGTTTCTGGGAAGAACTGTTCAGTGAAAATTTTGAGGGTGAGATAGACATTCCAAGCACTGAAGGTGACGATGAAGATGTCAATGTCTTGGCCAATCGCCTAGGCTACTTGGGTTCGAGTCCTTCGTAA 1077 0.4643 MDYPYPVKEEYLEATSSHSGGEASTIPPPQPMEGLHELGPPPFLIKTFDVVDDPATNYMVSWSRGGTSFVVWDPHAFSMSLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGHKHLLRNIRRRKAPANLSLSQQAQQQGHCVEVGRFGLDEEIDRLRRDKQVLMMELVRLRQQQQNTRSYLQAMEQRLQGTEKKQQHMMAFLARAMKNPAFLQQLLQQKDKRKELEEAITKKRRRPIEQGPSCGGESSTGGEATYPIKAEPLEFSNYGFGVSELEVLAMEMQGYGRGRREQEAAEGPRERLGKELDEGFWEELFSENFEGEIDIPSTEGDDEDVNVLANRLGYLGSSPS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3722g00013 358 FunFam Heat shock transcription factor 1 36 133 - -
Pral3722g00013 358 Coils Coil 162 182 - -
Pral3722g00013 358 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral3722g00013 358 Coils Coil 224 244 - -
Pral3722g00013 358 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral3722g00013 358 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral3722g00013 358 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral3722g00013 358 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 252 IPR027725 -
Pral3722g00013 358 MobiDBLite consensus disorder prediction 238 263 - -
Pral3722g00013 358 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Pral3722g00013 358 Gene3D - 36 133 IPR036388 -
Pral3722g00013 358 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral3722g00013 358 MobiDBLite consensus disorder prediction 14 33 - -
Pral3722g00013 358 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3722g00013 Pral-Chr3722 91516 95915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3722g00013 24 356 HSF AT3G22830 54.768 1.82e-130 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pral3722g00013 HSF_DNA-bind 2.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3722g00013 K09419 - gmx:100794264 532.717