Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3710g00012 ATGAAGCCTTTTTCTCCCATGTTTCTTTCATTTTGGTCCCAATCCCTTCACTTGCTTCTCTTCTTCACTTTGATCTTTCGACCTTGCCCAGCATCTTCTTCATGGGATAATGAGACCGATCATTTGTCCTTGCTCAAATTCAAGGAATCAGTATCTAGTGATCCAAGTCATATATTGGACTCTTGGAATAGTTCTACACACTTCTGCAACTGGCATGGCATCACTTGCGGCCACAAGCATCTCAGAGTTACACGGTTGGTCTTAAAAGGATATCAATTGAGTGGTTCTATATCACCTTTCATCGGCAATCTCTCTTTCCTCAGAACTATCGGTCTTCATAACAACAGTTTCTACGGAGAAATCCCACAAGATTTGGGTCGTTTGTTTCGGCTCCAGCTACTTTATCTCACCAATAATACATTGACTGGGAAATTTCCTGTCAACGTCACAAGTTGCTCTAAACTCAGGTACTTATCATTTGGTGGAAATAATCTTACAGGCAAAATACCCATGGAGATTGGCTATCTCCATAACCTTGAACAGTTATATTTACTTCGCAACAATTTTATCGGGAAAATCCCAATCTCCATGTGGAATCTGTCTTCCCTTACAGTTATTTCTTTTTCTGGAAATAAGCTAGAGGGGAATATACCTAAAGAAATAGGAAGCTTGGAAAATTTGACAAAATTTTCATTAGATGAAAACAAGCTTTCTGGGCCAATTCCTTCTTCTCTATACAATTTGTCATCCCTCACTTTTATTTCACTTTATTACAATCAATTTAATGGCTCTCTCCCAACCAACATGTTCAATAGCCTCCCTAATCTCCAATATTTGTCACTTGGAGGAAATCAAATCTCAGGTCCTATCCCAGCATCCTTGGCAAACGCCTCTATGCTTGAAGTGATATCTGTCGGAGTAAATAACTTTACAGGGCTAATTCCAAATCTTGGAAAGTTGCATGACCTTTCATTCCTAGAGTTTGGTGGAAATAATTTGGGAAGTAATTCTTCTAAAGATTGGGAGTTTCTGTACTCTTTGAGCAATTGTAGTAAGTTGCGAGTTCTAGCAATGACCTTCAATAATTTTGGGGGCCATTTACCAGATGCCATAGGCAATTTATCCACCCGACTCACACAGCTGGTTCTTAGTTATAATCAAATATTTGGCAAAATCCCTGCTTCATTAGGAAACCTTGTTAGCCTAACATTGCTAGAGATGGAGATGAATCATTTCACTGACATCATCCCAATTACTTTCAGGAATTTTCAAAACATGCAAATCTTGTACTTGTTTGGAAACAAATTTTCTGGAGAAATAAAACATTTCATAGGTAATCTCACCCAGTTACTTCACCTAGATTTGTCAGGAAACATGTTTGAAGGAAAGGTTTCCCCAACTATTGGTAATTGTAAGAGTTTACAATATCTTGATCTCTCACAAAACAACTTTAGTGGAGCCATACCAGTCCAGCTAATTACTCTTTCATCTCTATCGATTTTATTGAACTTATCCCATAACTCTTTTGGTGGTAATATCCCTAGTGAGGTTGGAAACTTAAAAAATATTGGTACCTTGGATGCCTCTCATAACCATATCTCTGGAAAAATTCCTCAAGCCATTGGAGATTGCCAAAGCTTAGAGTATCTCTTTTTGCAAGGAAATTTCTTTCAAGAAACCATCCCCTCATCTTTGGCTTCATTGAAAGGTCTAAGACAACTAGACTTGTCACAAAATAATTTGTCTGGATCAATTCCAAAAGGCCTGCAAGATATTGCTCTCTTGGAGTATCTAAATGTTTCCTTCAACATGCTTGATGGGGAAGTACCAAGCAAAGGCGTCTTCAGCAATACAAGTGCAATATCACTTGTGGGGAATAAGAAGCTTTGTGGAGGCATATCAAAGTTGGAGCTGCCACCATGCCCTCTCAAATCTACTGAACAACAAAAGCATCCAAATTTCAAGTTGCTCATATCAATATGTTGTGTGATTGCTTTTCTACTTCTAGCATCTGTTGTTGCTATTTATCATAGGAGAAAAAGAAGCAAGAAAGCTTCATGTTTAGAAACAATTGACATGATTTCAAAAGTATCATACCAAAGTTTGCATAATGCCACAGATGGATTCTCTATCAACAACTTGATAGGATCAGGGAGTTTTGGCTCTGTATATAGGGGAAGTTTTGAATCTAACGAAGTTGTTGCGATAAAGGTCATCAACCTTCAGATAAGGGGAGCTCACAAAAGTTTTGTGGCTGAATGCAATGCACTTAGAAATGCCAAGCATCGAAATCTAGTAAAACTAATAACATGTTGCTCTAGCATAGATTACAAAGGCCATGAATTTAAGGCTCTAGTTTATGATTATATGGTGAATGGAAACTTGGAAAATTGGTTGCATTCTAGAGCAGAGAATCTAGATCATCCAAGAATTTTGCTCCTTGATCAAATAATAAATATTCTTATTGATATTTCGTCTGCATTAAACTATCTTCACAATGAACATGGGCAACCTCTAATTCATTGTGATTTAAAGCCAAGCAATGTTCTTCTTGATGGCAACATGGTTGCTCATTTGAGTGATTTTGGATTGGCCAGACTATTATCAACTGTTGAAACCATCTCTAATAAGCAAAGTAGCACAATTGGAATAAAGGGTACTATTGGCTATGTTCCTCCAGAATATGTAATGGTTTCTGAGATATCAACACAAGGTGATATGTATAGCTTTGGCATTCTTGTCTTAGAGATGCTCACTAAAAGAAGACCCACTGAAGGTATGTTTAAAGATGGCCACAGTCTTCAAGCATATGTGAAAAATGCATTTCCAAACAAGCTTTTGGAAGTTGTAAGCCCAACTATTTTTCCACAAGAATTAGAACATGCAGTGATAACATCAGGAGACATATCAGAGAACATGATGCAAGTCCATCCTAATGTTCACAAATGCTTGCGTTGTTTGTTTATGATTGGACTTGCATGTTCAGTGGAATCGCCTCATGAAAGGATGAGCATAATTGATGTTCTAAGGGAGCTAAATTCTGTCAAAAGCTTTTTTCCGTTATGGTGA 3069 0.3757 MKPFSPMFLSFWSQSLHLLLFFTLIFRPCPASSSWDNETDHLSLLKFKESVSSDPSHILDSWNSSTHFCNWHGITCGHKHLRVTRLVLKGYQLSGSISPFIGNLSFLRTIGLHNNSFYGEIPQDLGRLFRLQLLYLTNNTLTGKFPVNVTSCSKLRYLSFGGNNLTGKIPMEIGYLHNLEQLYLLRNNFIGKIPISMWNLSSLTVISFSGNKLEGNIPKEIGSLENLTKFSLDENKLSGPIPSSLYNLSSLTFISLYYNQFNGSLPTNMFNSLPNLQYLSLGGNQISGPIPASLANASMLEVISVGVNNFTGLIPNLGKLHDLSFLEFGGNNLGSNSSKDWEFLYSLSNCSKLRVLAMTFNNFGGHLPDAIGNLSTRLTQLVLSYNQIFGKIPASLGNLVSLTLLEMEMNHFTDIIPITFRNFQNMQILYLFGNKFSGEIKHFIGNLTQLLHLDLSGNMFEGKVSPTIGNCKSLQYLDLSQNNFSGAIPVQLITLSSLSILLNLSHNSFGGNIPSEVGNLKNIGTLDASHNHISGKIPQAIGDCQSLEYLFLQGNFFQETIPSSLASLKGLRQLDLSQNNLSGSIPKGLQDIALLEYLNVSFNMLDGEVPSKGVFSNTSAISLVGNKKLCGGISKLELPPCPLKSTEQQKHPNFKLLISICCVIAFLLLASVVAIYHRRKRSKKASCLETIDMISKVSYQSLHNATDGFSINNLIGSGSFGSVYRGSFESNEVVAIKVINLQIRGAHKSFVAECNALRNAKHRNLVKLITCCSSIDYKGHEFKALVYDYMVNGNLENWLHSRAENLDHPRILLLDQIINILIDISSALNYLHNEHGQPLIHCDLKPSNVLLDGNMVAHLSDFGLARLLSTVETISNKQSSTIGIKGTIGYVPPEYVMVSEISTQGDMYSFGILVLEMLTKRRPTEGMFKDGHSLQAYVKNAFPNKLLEVVSPTIFPQELEHAVITSGDISENMMQVHPNVHKCLRCLFMIGLACSVESPHERMSIIDVLRELNSVKSFFPLW 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3710g00012 1022 SUPERFAMILY L domain-like 376 631 - -
Pral3710g00012 1022 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Pral3710g00012 1022 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Pral3710g00012 1022 ProSitePatterns Protein kinases ATP-binding region signature. 715 737 IPR017441 GO:0005524
Pral3710g00012 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 37 199 - -
Pral3710g00012 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Pral3710g00012 1022 Gene3D Ribonuclease Inhibitor 272 338 IPR032675 -
Pral3710g00012 1022 SUPERFAMILY L domain-like 38 333 - -
Pral3710g00012 1022 Gene3D Transferase(Phosphotransferase) domain 1 790 1018 - -
Pral3710g00012 1022 Gene3D Ribonuclease Inhibitor 339 642 IPR032675 -
Pral3710g00012 1022 Pfam Protein kinase domain 711 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00012 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 346 1014 - -
Pral3710g00012 1022 SMART LRR_typ_2 399 422 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 200 224 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 568 591 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 495 520 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 273 297 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 248 272 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 104 128 IPR003591 -
Pral3710g00012 1022 SMART LRR_typ_2 447 471 IPR003591 -
Pral3710g00012 1022 Gene3D Ribonuclease Inhibitor 37 195 IPR032675 -
Pral3710g00012 1022 ProSiteProfiles Protein kinase domain profile. 709 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00012 1022 SUPERFAMILY Protein kinase-like (PK-like) 687 1012 IPR011009 -
Pral3710g00012 1022 SMART serkin_6 709 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00012 1022 Gene3D Ribonuclease Inhibitor 196 271 IPR032675 -
Pral3710g00012 1022 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Pral3710g00012 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 339 647 - -
Pral3710g00012 1022 Gene3D Phosphorylase Kinase; domain 1 670 789 - -
Pral3710g00012 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 288 - -
Pral3710g00012 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 680 789 - -
Pral3710g00012 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3710g00012 Pral-Chr3710 394325 397489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3710g00012 35 1019 Receptor kinase-like Gene Family AT3G47570 44.456 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3710g00012 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3710g00012 - - qsa:O6P43_025027 1167.91