Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3710g00004 ATGTCTGAAAATGATTCCACTAAGCTGCTAGCATTATTCTTGTGTGTTACTTTCTTTGCATTTGTCTCCGCTAGAGATAGCGAAGCAAAAGCTCTGTTGAACTGGAGAGCTAGCTTCAATGACCAAAGCAAAGCTATCTTGTCCTCTTGGAATAATGCCACTGATCCTTGCAGACAGTTGTGGAGGGGAATTTCTTGTGATGAACACATGTCTGTGATCAACATAAGTCTCTCAAATCTTGGCCTTCAAGGTAAACTTTCCACTCTCAACTTCGCTGCCTTTCCTAATCTCCTCTACTTCGACATACGTTACAACCAATTTTATGGATACGTTCCCCATGAAATTGGTTATTTGCCCAGGATTTCGATATTGGGTTTGTCAGATAATCCAATTTGGGGTCGCATTCCTCCTGAAATCTGGAATCTAACCACTCTAAGTCAACTTGATCTTAGTACATGCAATCTCACAGGACAAATTCCCCAAGAAATTGGGAATTTGAGGAATTTGAATCTCCTGTGGCTTGGAGAAAATTTGCAGCTTTCTGGTCCCATCCCGGAAGAGATTGGAATGTTGAGTAATCTTGTAGACCTTCGTTTGCAAAGCAACTATCTGTCAGGGAGAATCCCATCATCAATTGGAAATTTGACCAAGTTACAGATGCTTTCTCTTTATGAGAACAATCTCGCAGGTCCTATTCCTACTGAATTCTGGAAACTCTATTCCCTTGTTAACATTCAATTCCGTTATAATAGATTTTCAGGGCCAATCTCTCCCTCTATAGGAAATCTAACAAATCTCATACAATTGTCCTTTTCTAATAACAAATTTTCTGGTCCGATTCCTCCATCCATTGGTAATTTGATCGATCTAGACCATTTCTTCCTTCGAAACAATAGTCTTTCAGGATCTGTTCCTTCCTCTATAGGAAATATGACGAAGGTCATTGGATTGCACTTGGACATCAACAATTTTAGTGGTCGACTTCCGCAAGAAATGAATAACTTAACAAGTTTGTATTATGTGCGACTGAGTGATAATCATTTTAGTGGTCCTTTGCCACAAAAAATTTGTGAAAGTGGGAGGTTATTTTGGTTTAATGCTAATGATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGAATTGTTCTAGTCTAAAAAGACTCAGGCTTGAAAATAACCAAATAGTAGATAATATAACATATGCTTTTGGAGTATATCCTTATTTGCGCTTTGTTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCTGGGTGGGGGAGGTGTCAAAATCTCACTCATTTGACTATTCACAGCAACAAGCTTTCTGGTGATATACCACCAAAATTAGGAGAGGCAACTCGGCTTGAATTACTTGACTTGTCTTCAAATCATTTGTCTGGACAAATCCCAAAAGAATTGAGAAAGTTGGTCTTTTTGCGATTCCTCTTTCTGACCCATAACAACTTTTCTGGTGGTATCCCCTCAAATATAATAAGATCACTTAACCAGCTTGAAAAGTTGGACTTGGCAGAAAATAAAATTAGTGGCTCAATCACAAGAGAGTTCGGGGTATTAAAAAGGTTAAGGATCTTGAATTTAAGCAAAAACAAATTTGATGAAAGCATTCCCATTGAGTTTGGCCAACTAGAGGGGCTTGAAGAACTTGATCTTAGTGACAATTTCTTGACTGGCACAATAGCAGCAACATTTGGAATGTTCCCCAACTTGCAAGTATTGAACCTTTCACATAACAGTCTTAATGGCACCATCCCTTCTAGCTTTAATGGACCAGTGTCAGCATTATCTGTAGTTGACATATCATACAATCAATTGGAAGGCCCTGTTCCAAACAAACCAGCCTTTCGTAACTTTGATGCATTGAGGAATAACAAAGGTTTGTGCGGTAATATCGCTGGCTTAAGTCCTTGTGGAGATTTCCAAACAAATGGGCACAACCAAAAGACCAAAAAGTTCTTGATAATACTCCTCCCTTTGGCCCTGCTGCTACTAGTACTTGTTGGAGCATCTGTCATTTTTTCTCTAATAGTAGCAAAAGCTAAAAACAAAGATGGAGAAGCTCGACCAGAAGATGTTTATTTTGTATGGAGTCTTGAAAGAGAAATATTGTATGAAGATATCATTGAAGCCACAAACGAATTTGATGAAAGATATCTAGTTGGGAGAGGAGGCCAAGGAAGTGTTTATAGAGCTGAGTTGCCTACAGGTGACATTGTTGCAATAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCAGAAAGCTTTTACAAGAGAAATTCGAGCCTTGACGGAAATCAAACATCGTAATATTGTGAAGTTGTATGGGTTTTATTCCAGTCCACAACTCTCCATTTTGGTTTATGAGTTCTTGGAAGGTGGTAACTTGGATAGCATACTAAAGGATGAGAACCAAGCCACTGAGTTTGATTGGAAAAAGAGGGTGAATGTTGTCAAAGGTGTGGCTAATGCTTTATTCCATATGCACCATGGTTGTTCAATTCCTATCATTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTAACTATGAAGAAGCTCGCATCATTGATTTTGGAACGGCAAAGTTTTTGAATCCTAACTCAAAAAATATGACCACATTTGCTGGCACATTTGGGTATGCTGCACCAGAGCTTGCTTTCATCATGGAAGCGAATGAAAAATGTGATGTATATAGCTTTGGAATGTTGACTTTAGAAATCATCATGGGTACACATCCTGCAGAGCTTATTTCATACTTGGCAGAGAAACCGACTAATAATGGTTTGTTGTTTAAGAATGTAGTGGACCCACGACTTTCTCCCTTGACATTCAGAAAACCAGTTCAAGATGAAGTTATTTTAGTTGCAAAAATAGCATTTTCTTGCTTGACTGAGAATCCTCGGTCTCGTCCAACTATGGAACAAGTATCTACGGAGCTTGTAAGGAGACCAATATCTCATTTACAGGATCAATTTCACAGCATCACAATTGCAAAACTCATGAGGGATTGA 3051 0.3864 MSENDSTKLLALFLCVTFFAFVSARDSEAKALLNWRASFNDQSKAILSSWNNATDPCRQLWRGISCDEHMSVINISLSNLGLQGKLSTLNFAAFPNLLYFDIRYNQFYGYVPHEIGYLPRISILGLSDNPIWGRIPPEIWNLTTLSQLDLSTCNLTGQIPQEIGNLRNLNLLWLGENLQLSGPIPEEIGMLSNLVDLRLQSNYLSGRIPSSIGNLTKLQMLSLYENNLAGPIPTEFWKLYSLVNIQFRYNRFSGPISPSIGNLTNLIQLSFSNNKFSGPIPPSIGNLIDLDHFFLRNNSLSGSVPSSIGNMTKVIGLHLDINNFSGRLPQEMNNLTSLYYVRLSDNHFSGPLPQKICESGRLFWFNANDNHFTGPIPTSLKNCSSLKRLRLENNQIVDNITYAFGVYPYLRFVDLSGNQLYGHLSSGWGRCQNLTHLTIHSNKLSGDIPPKLGEATRLELLDLSSNHLSGQIPKELRKLVFLRFLFLTHNNFSGGIPSNIIRSLNQLEKLDLAENKISGSITREFGVLKRLRILNLSKNKFDESIPIEFGQLEGLEELDLSDNFLTGTIAATFGMFPNLQVLNLSHNSLNGTIPSSFNGPVSALSVVDISYNQLEGPVPNKPAFRNFDALRNNKGLCGNIAGLSPCGDFQTNGHNQKTKKFLIILLPLALLLLVLVGASVIFSLIVAKAKNKDGEARPEDVYFVWSLEREILYEDIIEATNEFDERYLVGRGGQGSVYRAELPTGDIVAIKKLHSMPSGEISNQKAFTREIRALTEIKHRNIVKLYGFYSSPQLSILVYEFLEGGNLDSILKDENQATEFDWKKRVNVVKGVANALFHMHHGCSIPIIHRDISSKNVLLSSNYEEARIIDFGTAKFLNPNSKNMTTFAGTFGYAAPELAFIMEANEKCDVYSFGMLTLEIIMGTHPAELISYLAEKPTNNGLLFKNVVDPRLSPLTFRKPVQDEVILVAKIAFSCLTENPRSRPTMEQVSTELVRRPISHLQDQFHSITIAKLMRD 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3710g00004 1016 FunFam MDIS1-interacting receptor like kinase 2 802 998 - -
Pral3710g00004 1016 Pfam Protein kinase domain 727 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00004 1016 Gene3D Transferase(Phosphotransferase) domain 1 802 1008 - -
Pral3710g00004 1016 FunFam Piriformospora indica-insensitive protein 2 258 354 - -
Pral3710g00004 1016 FunFam Leucine-rich repeat receptor protein kinase EMS1 178 257 - -
Pral3710g00004 1016 SUPERFAMILY Protein kinase-like (PK-like) 702 993 IPR011009 -
Pral3710g00004 1016 SMART LRR_typ_2 552 575 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 263 287 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 479 503 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 191 215 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 576 599 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 118 142 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 528 551 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 504 527 IPR003591 -
Pral3710g00004 1016 SMART LRR_typ_2 335 359 IPR003591 -
Pral3710g00004 1016 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 355 650 - -
Pral3710g00004 1016 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 317 994 - -
Pral3710g00004 1016 SUPERFAMILY L domain-like 26 279 - -
Pral3710g00004 1016 FunFam Nuclear pore complex protein NUP107 25 177 - -
Pral3710g00004 1016 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Pral3710g00004 1016 ProSitePatterns Tyrosine protein kinases specific active-site signature. 847 859 IPR008266 GO:0004672|GO:0006468
Pral3710g00004 1016 SUPERFAMILY RNI-like 280 619 - -
Pral3710g00004 1016 Gene3D Ribonuclease Inhibitor 316 648 IPR032675 -
Pral3710g00004 1016 Pfam Leucine rich repeat 554 614 IPR001611 GO:0005515
Pral3710g00004 1016 Gene3D Phosphorylase Kinase; domain 1 685 801 - -
Pral3710g00004 1016 ProSiteProfiles Protein kinase domain profile. 723 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00004 1016 PRINTS Leucine-rich repeat signature 576 589 - -
Pral3710g00004 1016 PRINTS Leucine-rich repeat signature 458 471 - -
Pral3710g00004 1016 FunFam Leucine-rich repeat receptor protein kinase MSP1 686 801 - -
Pral3710g00004 1016 Gene3D Ribonuclease Inhibitor 240 314 IPR032675 -
Pral3710g00004 1016 Gene3D Ribonuclease Inhibitor 179 239 IPR032675 -
Pral3710g00004 1016 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3710g00004 Pral-Chr3710 166954 170105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3710g00004 9 900 Receptor kinase-like Gene Family AT4G08850 41.183 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3710g00004 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3710g00004 - - pcin:129295243 1132.86