Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3710g00001 ATGTTCTTCTTTCTTGTTGCTTCCTTTACATTTTTTGTTTCCGCTGCCATTGAAGATGGTGAAGCAAAAGCTCTGTTGAACTGGAAAGCCAGCCTTACTGAGCAAAGCCAAGCAACGTTGTCTTCGTGGAATAATGGCACTAATCTTTGCAGAAACTGGAAGGGAATTTCATGTGATGAAGAATCCATGTCTGTGATCAATATAAGTCTGTCAAATCTTGGCCTACAAGGTACACTTCACAGTCTCAGCTTTGCTTCATTTCCTAGTCTGCAGTATTTTGACCTGGGTTACAACCAATTTTATGGAAACATTCCCCAAGAGATTGGTAACCTCTCCAGTATTTTGAGGTTCAATTTGTCGGAGAATCCTTTAATTACTGGTCCCATTCCTAAAGAAATAGGAGCTTTGAGCACTCTCAGTGTTCTTGATCTTAGTGTATGTAAGCTTACGGATAGAATACCCAGTGAAATTGGGAACTTGAGGAACCTGACGGATCTAGTGCTTGCTCGAAATTCTCTTTCTGGCTCCATTCCAGAAGAGATTGGAATGTTGAGTAGACTTTTACAACTTGATTTGGCTAGAAACTCCATGCTATCTGGTAGAATCCCATCATCAATTGGAAACTTGAACATGTTACAAGAACTTTATATCGATTTTTGCAATCTCTCTGGTCCTATACCAAATGAAATTGGAAAACTCGATTCTCTCAAGACAATTTATTTAGAAAGCAATAAACTTTATGGGCCAATCCCTCCCTCTATGGGGAACTTGACAGGTCTCGAGGAGTTGGTCTTGTCAAATAACAATCTTTCTGGTTTAATTCCTCAATCCATTGGAAACTTGATCAATTTACAAGAAATCTATCTAGAATATAACAATCTTTCAGGACCTATTCCTTCCACCATTGGAAACTTGACAAAGCTCGACACTCTAGTATTGATTGAGAACAACCTCAGTGGTCAACTTCCTCGAGAAATGAACAACATAAGTTGGTATAATTTACAAGTGGGTAATAATCATTTCCAAGGCCAACTGCCACAAGAAATTTGTCAGGGTGGGATGTTAATTAGGTTTGTTGCTCAAAATAACCAGCTCATTGGTCCCATTCCAACTAGTTTGAAGAATTGTTCTAGTTTAAGAAGACTCAGGCTTCAGGGTAATCAACTAGTTGATAATGTAACAGATGCTTTTGGAGTATATCCTGATTTGGACTTCATTGATCTAAGTGGAAATCAACTGTATGGCCACCTTTCATCCAGTTGGGGAAAGTGTCAAAATCTCAAGCAATTGTATGTTAACAATAACAAGCTTTTCGGTGATATACCACCAGAACTAGGGGAGGCAGCTAAGCTTGGTGAACTTGACTTGTCTTCAAATCATTTGTATGGACAAATTCCAAAAGAACTAGGCAAGTTGATAATGTTGACAAAACTATTGTTGAGCCACAATAACTTCTCTGGTAATGTTCCCTCAAATATAAGATCGCTTACTCAACTTGAAACATTAGAGTTGGCAGCAAATAATTTCTATGGCTTAATCACAAGAGAGCTTGGGGAATTAAAAAGCTTAAAGTTCTTGAATTTGAGTAGAAACAAATTTGATGGAAGTATTGCCCTTCAGTTTGGTCAACTCCGAGAGCTTGAACAACTTGATCTTAGTGACAATTTGCTCAATGGAACAATACCATCAGCGCTTGGCATGTTACCCAAATTGCAAGTATTGAACCTCTCGCATAATGATCTCACTGGTGCTATTCCTTCTGGTTTTAGTGGATCAATGTCAACTTTGACTATTATTGACCTATCAAACAATCAATTAGAAGGCCTTGTTCCAAACAAACCAGCCTTTCAAACATTTGAAGGATTGAAGAATAATAAAGGTTTGTGTGGTAATGTCACTGGCTTACATCCTTGTAGTAATTCTCAAATGAGTCATAAGAGCAAAATCTTCTTGAAGATATTCCTCCCATTAGCAATACTACTACTAGTAGTGGTTGGAGCTTCTTTTATCTTTCTCCTACATGCAAGAAAAGCAAAAACCAAAGATGAAGAAGCACAATCACAGGACATTTATTTTGTATGGAGTTCCAACAGAGAAATATTGTATGAAAATATCATCGAAGCCACAATGAACTTTGATGATAGATATCTAGTTGGGAAAGGTGGCCAAGGAAGTGTTTATAAGGCCGAGTTGCCTACAGGTGATGTTGTTGCTGTAAAAAAGCTTCATTCCTTACCAAGTGGGGAAATCTCTCACAAGAAAGCTTTCACAAGTGAGATTCGAGCTCTGACAGAAATCAAACATCGCAACATTGTGAAGTTGTATGGGTTTTGTTCTAACTCACGATTCTCCTTTCTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGACAACATACTAAAGGATGAAGCACAAGCCACTAAGCTTGATTGGAAAAAGAGAGTGAATGCCGTTAAAGGTGTCGCTGGTGCTTTATTCCACATGCATCATGGCTGTTCATTTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTACTTCTAACTTCAGAATATGAAGAAGCTCACCTCATTGACTTTGGAACAGCCAAGTTTCTGAATCCTAACTCAAACAATATGACCACATTTGTTGGCACCTTCGGTTACGCTGCTCTAGAGATTGCTTATGTTATGGAAGCGAACGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGACTTTGGAGATCGTTATGGGAATGCATCCCGGAGAGCTTATTTCATCTTTGATGGAGAAATCAACCACATATGATTTGCTATTAAAGGATGTGTTGGATCCACGACTTTCAACACCTAGAAAATCAATCATTGATGAGGTTATTACAGTTGCAAAAATAGCATTTTTTTGTTTGAATGAGGATCCTCGTTCTCGTCCAACAATGGAACAAGTATCTAAGGAGCTTGAACGGCAGCCAAAGTCTCATATGGAAGAACCATTAGTCAGCATCACAATTGGACAACTAATGAATGATTAG 3012 0.3845 MFFFLVASFTFFVSAAIEDGEAKALLNWKASLTEQSQATLSSWNNGTNLCRNWKGISCDEESMSVINISLSNLGLQGTLHSLSFASFPSLQYFDLGYNQFYGNIPQEIGNLSSILRFNLSENPLITGPIPKEIGALSTLSVLDLSVCKLTDRIPSEIGNLRNLTDLVLARNSLSGSIPEEIGMLSRLLQLDLARNSMLSGRIPSSIGNLNMLQELYIDFCNLSGPIPNEIGKLDSLKTIYLESNKLYGPIPPSMGNLTGLEELVLSNNNLSGLIPQSIGNLINLQEIYLEYNNLSGPIPSTIGNLTKLDTLVLIENNLSGQLPREMNNISWYNLQVGNNHFQGQLPQEICQGGMLIRFVAQNNQLIGPIPTSLKNCSSLRRLRLQGNQLVDNVTDAFGVYPDLDFIDLSGNQLYGHLSSSWGKCQNLKQLYVNNNKLFGDIPPELGEAAKLGELDLSSNHLYGQIPKELGKLIMLTKLLLSHNNFSGNVPSNIRSLTQLETLELAANNFYGLITRELGELKSLKFLNLSRNKFDGSIALQFGQLRELEQLDLSDNLLNGTIPSALGMLPKLQVLNLSHNDLTGAIPSGFSGSMSTLTIIDLSNNQLEGLVPNKPAFQTFEGLKNNKGLCGNVTGLHPCSNSQMSHKSKIFLKIFLPLAILLLVVVGASFIFLLHARKAKTKDEEAQSQDIYFVWSSNREILYENIIEATMNFDDRYLVGKGGQGSVYKAELPTGDVVAVKKLHSLPSGEISHKKAFTSEIRALTEIKHRNIVKLYGFCSNSRFSFLVYEFLEGGSLDNILKDEAQATKLDWKKRVNAVKGVAGALFHMHHGCSFPIVHRDISSKNVLLTSEYEEAHLIDFGTAKFLNPNSNNMTTFVGTFGYAALEIAYVMEANEKCDVYSFGVLTLEIVMGMHPGELISSLMEKSTTYDLLLKDVLDPRLSTPRKSIIDEVITVAKIAFFCLNEDPRSRPTMEQVSKELERQPKSHMEEPLVSITIGQLMND 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3710g00001 1003 Gene3D Ribonuclease Inhibitor 18 180 IPR032675 -
Pral3710g00001 1003 SUPERFAMILY Protein kinase-like (PK-like) 689 981 IPR011009 -
Pral3710g00001 1003 Gene3D Phosphorylase Kinase; domain 1 673 790 - -
Pral3710g00001 1003 SUPERFAMILY L domain-like 33 389 - -
Pral3710g00001 1003 FunFam Leucine-rich receptor-like protein kinase family protein 129 227 - -
Pral3710g00001 1003 SUPERFAMILY RNI-like 296 609 - -
Pral3710g00001 1003 ProSitePatterns Tyrosine protein kinases specific active-site signature. 836 848 IPR008266 GO:0004672|GO:0006468
Pral3710g00001 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 329 642 - -
Pral3710g00001 1003 Gene3D Ribonuclease Inhibitor 332 642 IPR032675 -
Pral3710g00001 1003 PRINTS Leucine-rich repeat signature 568 581 - -
Pral3710g00001 1003 PRINTS Leucine-rich repeat signature 547 560 - -
Pral3710g00001 1003 Pfam Protein kinase domain 717 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00001 1003 ProSiteProfiles Protein kinase domain profile. 712 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3710g00001 1003 Gene3D Ribonuclease Inhibitor 183 258 IPR032675 -
Pral3710g00001 1003 Gene3D Ribonuclease Inhibitor 259 331 IPR032675 -
Pral3710g00001 1003 Gene3D Transferase(Phosphotransferase) domain 1 791 995 - -
Pral3710g00001 1003 FunFam Leucine-rich receptor-like protein kinase family protein 228 324 - -
Pral3710g00001 1003 Pfam Leucine rich repeat 541 581 IPR001611 GO:0005515
Pral3710g00001 1003 Pfam Leucine rich repeat 235 294 IPR001611 GO:0005515
Pral3710g00001 1003 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 334 981 - -
Pral3710g00001 1003 FunFam MDIS1-interacting receptor like kinase 2 791 986 - -
Pral3710g00001 1003 SMART LRR_typ_2 544 567 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 472 496 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 593 618 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 520 543 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 87 111 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 568 591 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 257 280 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 160 184 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 424 448 IPR003591 -
Pral3710g00001 1003 SMART LRR_typ_2 281 305 IPR003591 -
Pral3710g00001 1003 FunFam Leucine-rich repeat receptor protein kinase MSP1 675 790 - -
Pral3710g00001 1003 FunFam Nuclear pore complex protein NUP107 18 126 - -
Pral3710g00001 1003 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3710g00001 Pral-Chr3710 95764 99012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3710g00001 5 884 Receptor kinase-like Gene Family AT4G08850 43.135 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3710g00001 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3710g00001 - - pcin:129318235 1210.67