Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3708g00004 ATGCCCGAAAGCGAATACTCCTCTAGGCTTCCATCATTACGGGGTACTATTCTCTCCATATTCTTCTGCATTGTTGCTTCACTTGCATTTTCTGCTGCTTCTGCTATTGAGGTTGGCGAAGCCAAAGCTCTGCTGAACTGGAAAGCGAGCCTTACCAAACAAAGCCAAGCGACATTGTCTTCATGGAACAGTAATGGCACTGATCTTTGCAGAAACTGGAAGGGAATTTCATGTGATGAAGAATCCGTGTCGGTGATCAGTATAAGACTGTCAAATCTTAGCCTTCAAGGTAAACTTCGCTATCTCAGCTTTGCTTCGTTTCCTAGTCTGCAATATTTTGACCTGAGTTACAACCACTTCTATGGCAACATTCCCCAAGAGATTGGTAACTTGTCCAGTATTTTGAAGTTTGATTTGTCAGAGAATCCTTCAATTACTGGTCCCATTCCTAAAGAAGTAGGAGCTTTGAGCACTCTCAGTGTTCTTGATCTTAGTGCATGTAAGCTCACGGATAGAATTCCTAGTGAAATTGGGAACTTGAGGAACCTAACGGATCTGGTGCTTGGTCAAAATTCTCTTTCTGGTTCCATTCCAGAAGAGATTGGAATGTTGAGTGATCTTTTACTACTTGATTTGGCCAAAAACTCCATGTTATCTGGTAGAATCCCATCATCAATTGGAAACTTGAACATGTTACAAGAACTTTATATTGATTTTTGCAATCTCTTTGGTCCTATACCAAATGAAATTGGAAAACTCAATTCTCTCACGACAATTTATTTAGAAAGCAATAAACTTTATGGGTCAATCCCTCCCTCTATGGGGAACTTGATAGGTCTTGAGGAGTTGGTCTTGTCGAATAACAATCTTTCTGGTTCAATTCCTCAATCCATTGGAAACTTGATCAATTTACAAGAAATCTATCTAGATCATAACAACCTTTCAGGATCTATTCCTTCCACTATAGGAAATTTGCCAAAGCTCAACACTCTATTATTGATGGAGAACAATCTTAGTGGTCACCTTCCAGGAGAAATGAATAACATAACTTGGCACAATTTACAACTGGGTGATAATCATTTCCAAGGCCAATTACCACAACAGATTTGTCAGGATGGGAAGTTATATAGGTTTGTAGCTCAAAATAACCAGTTCATGGGTCCCATTCCAACTAGTTTGAAGAACTGTTCTAGTCTAGAAAGACTCAAGCTTCAAGGTAACCAACTAACTGACAATATAACATATGCTTTTGGAGTATATCCTTATTTGGACTTCATTGATCTAAGTGGAAATAAATTGTATGGTTACCTTTCATCCAAGTGGGGGAAGTGTCGAAATCTTAAACAATTGTTTATTCACAATAACAACCTTTCTGGTGAAATACCATCAGAGATGGGGGAGGCAGCTAAGCTTGTTGAACTTGACTTGTCTTCAAATCATTTGTCTGGACAAATCCCAAAAGAACTAGGCAAGTTGATAATGTTGACAAAACTCTTTTTGAGCCACAATAACTTCTCTGGTAACGTCCCCTCAAATATAAGATCACTTAGTCAACTTGAAACATTGGAGTTGGCCACAAATAATTTCTATGGCTTAATCACAAGAGAGCTTGGGGAACTAAAAAACTTAAAGTTCTTGAACTTGAGCAGAAACAAATTTGATGAAAGCATTCCCCTTGAGTTCGGTCAACTCCAGGAGCTTGAACAACTTGATCTTAGTGACAATTTGCTCAATGGAACAATACCATCAGTGCTTGGAATGTTACCCAAATTGCAAGTATTGAACCTCTCACATAATGATCTCACTAGCACCATTCCTTCTAGTTTTAGCAGATCAATGTCAGCTTTGACTACTGTTGACTTATCAAACAATCAATTAGAAGGCCCCGTTCCAAACAAACCAGTCTTTCAAATATTTGAAGGATTGAAGAATAATAAAGGTTTGTGCGGTAACGTCACTGGTTTACATCCTTGCAGTAATTCTCAAATGCGTGCAAAAAACAAAGATGAAAAAGCACAATCACAGGACATTTATTTTGTATGGAGTTCCAATAGAGAAATATTGTATGAAAATATCATCGAAGCCACAATGCACTTTGATGATAGATATCTCATTGGGAAAGGTGGCCAAGGAAGTGTTTACAAGGCAGAGTTACCAACAGGTGATATTTTTGCTGTAAAAAAGCTTCATTCCTTACCCAGTGGAGAAATCTTCAGCGAGAAAGCTTTCACAAGTGAGATTCGTGCTTTGATAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGTTTTTGTTCCAATCCACGATTCTCTTTTTTGGTCTATGAGTTCTTGGAAGGTGGCAGCTTGGACAACATACTAAAGAATGAGAACCAAGCCACTAAGCTTGATTGGAAAAAGAGAGTGAATGTTGTTAGAGGTGTCGCCAGTGCTTTATTCCATATGCATCATGGCTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAACTATAGAATATGAAGAAGCTCGGCTCATTGACTTTGGAGGAGCGAAGTTTCTCAATCCTGACTCAAAAAATGTGACCACATTCGTTGGTACCTTCGGGTATGCTGCTCCAGAGATTGCATATATTATGGAAGCAAACGAGAAATGTGATGTTTACAGCTTTGCAGTGTTGACTTTAGAGATAATTATGGGAATACATCCAGGAGAGCTTATTTCATCTTTGATGGAAAAATCAACCGCGTATGATTTGCTATTAAAGGATATGTTGGACCCACGACTTTCACCGCCTAGGAAATCAATCCTTGACGAGGTTATTGCAGTTGCAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTCAGTCTCGTCCAACCATGGAACAAGTATCTATGAAGCTTGATCGGCGACCAAAGCCTCACATGGAAGAACCATTTGTCACGGTCACAATTAGACAACTAATGAATGATTAA 2973 0.3858 MPESEYSSRLPSLRGTILSIFFCIVASLAFSAASAIEVGEAKALLNWKASLTKQSQATLSSWNSNGTDLCRNWKGISCDEESVSVISIRLSNLSLQGKLRYLSFASFPSLQYFDLSYNHFYGNIPQEIGNLSSILKFDLSENPSITGPIPKEVGALSTLSVLDLSACKLTDRIPSEIGNLRNLTDLVLGQNSLSGSIPEEIGMLSDLLLLDLAKNSMLSGRIPSSIGNLNMLQELYIDFCNLFGPIPNEIGKLNSLTTIYLESNKLYGSIPPSMGNLIGLEELVLSNNNLSGSIPQSIGNLINLQEIYLDHNNLSGSIPSTIGNLPKLNTLLLMENNLSGHLPGEMNNITWHNLQLGDNHFQGQLPQQICQDGKLYRFVAQNNQFMGPIPTSLKNCSSLERLKLQGNQLTDNITYAFGVYPYLDFIDLSGNKLYGYLSSKWGKCRNLKQLFIHNNNLSGEIPSEMGEAAKLVELDLSSNHLSGQIPKELGKLIMLTKLFLSHNNFSGNVPSNIRSLSQLETLELATNNFYGLITRELGELKNLKFLNLSRNKFDESIPLEFGQLQELEQLDLSDNLLNGTIPSVLGMLPKLQVLNLSHNDLTSTIPSSFSRSMSALTTVDLSNNQLEGPVPNKPVFQIFEGLKNNKGLCGNVTGLHPCSNSQMRAKNKDEKAQSQDIYFVWSSNREILYENIIEATMHFDDRYLIGKGGQGSVYKAELPTGDIFAVKKLHSLPSGEIFSEKAFTSEIRALIEIKHRNIVKLYGFCSNPRFSFLVYEFLEGGSLDNILKNENQATKLDWKKRVNVVRGVASALFHMHHGCSIPIVHRDISSKNVLLTIEYEEARLIDFGGAKFLNPDSKNVTTFVGTFGYAAPEIAYIMEANEKCDVYSFAVLTLEIIMGIHPGELISSLMEKSTAYDLLLKDMLDPRLSPPRKSILDEVIAVAKIAFSCLNENPQSRPTMEQVSMKLDRRPKPHMEEPFVTVTIRQLMND 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3708g00004 990 PRINTS Leucine-rich repeat signature 471 484 - -
Pral3708g00004 990 PRINTS Leucine-rich repeat signature 588 601 - -
Pral3708g00004 990 SUPERFAMILY L domain-like 56 344 - -
Pral3708g00004 990 Gene3D Ribonuclease Inhibitor 353 660 IPR032675 -
Pral3708g00004 990 Gene3D Ribonuclease Inhibitor 214 352 IPR032675 -
Pral3708g00004 990 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Pral3708g00004 990 Gene3D Transferase(Phosphotransferase) domain 1 778 979 - -
Pral3708g00004 990 Gene3D Phosphorylase Kinase; domain 1 661 777 - -
Pral3708g00004 990 FunFam Leucine-rich receptor-like protein kinase family protein 246 344 - -
Pral3708g00004 990 FunFam Leucine-rich repeat receptor protein kinase MSP1 662 777 - -
Pral3708g00004 990 SUPERFAMILY RNI-like 314 630 - -
Pral3708g00004 990 Pfam Protein kinase domain 703 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3708g00004 990 ProSiteProfiles Leucine-rich repeat profile. 590 611 IPR001611 GO:0005515
Pral3708g00004 990 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Pral3708g00004 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 348 662 - -
Pral3708g00004 990 Pfam Leucine rich repeat 561 601 IPR001611 GO:0005515
Pral3708g00004 990 Pfam Leucine rich repeat 255 314 IPR001611 GO:0005515
Pral3708g00004 990 FunFam MDIS1-interacting receptor like kinase 2 778 972 - -
Pral3708g00004 990 FunFam Nuclear pore complex protein NUP107 37 189 - -
Pral3708g00004 990 PANTHER LEUCINE RICH REPEAT KINASE 2 298 970 - -
Pral3708g00004 990 SMART LRR_typ_2 540 563 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 492 516 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 180 204 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 277 300 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 107 131 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 564 587 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 301 325 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 588 612 IPR003591 -
Pral3708g00004 990 SMART LRR_typ_2 253 276 IPR003591 -
Pral3708g00004 990 SUPERFAMILY Protein kinase-like (PK-like) 675 965 IPR011009 -
Pral3708g00004 990 ProSitePatterns Tyrosine protein kinases specific active-site signature. 823 835 IPR008266 GO:0004672|GO:0006468
Pral3708g00004 990 ProSiteProfiles Protein kinase domain profile. 699 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3708g00004 Pral-Chr3708 76882 80047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3708g00004 20 872 Receptor kinase-like Gene Family AT4G08850 41.613 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3708g00004 Pkinase 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3708g00004 - - pcin:129318235 1149.04