Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3707g00002 ATGAAGACAACGATCTCTTGGATTCTTGCTTTGCTTCTTCTGGTTCCCTTCTTCGTTATTGTTGCAGATGCTGCTAATAATACGGGTTTCATAAGTATAGACTGTGGAGCAAGCGGAGATTATGTTGATGCAATAACTGGGATTTGGTACCAAACAGATGAAGGCTTCATAGAAAGTGGATCCAATCGTGAAATACCAGCCATCTTTAAATTCATCAATGAGCTTCCATACATGGGGCGTCAGCTAAAAACATTCAGAAGTTTTCCAGAGGGAGAAAGGAACTGTTACACTTTGAGACCAATAAAACAAAAGCAGAAGTATTTGATCAGAGCTTCATTTGCTTATCAGAATTTTGACTACAAAAACAAGTTCCCAAAGTACTTGAGGTCAAGCAGACTCAAAGGACAAATATCTGAATCCTTTGCGCTTTTGAAAAATTTGGAGTACTTGGATTTGTCCAACAATGAATTGATAGGAGAACTACCAGAATTTCTTGCAACTCTTCCTAATTTAAAATTCATTAATATGAATGGAAACAAGCTCTCAGGTTCAATTCCCAGGGCTTTGAAGGAAAATGCTAATTTGATGTTCAGTGTAGCCAACAATCCAGGCCAGTTTCAGTTAGATTCATGCGACGACAACCAACGCAAATTTGTTATTATCCCTCTTATTATTACATCAATCACAGTCATTATCCTAATTGCCATTCTTTCTGTGATGATTTGGAGACTGAGAAAGAACAGACATGATTTATCTACAAATAAATACTTGAAGATGGAAATTCCAAAACGGAAGAATCGAGAATTCTCTTACTCGCAAGTTCTTCAAATCACCAGCAATTTCAAAACTCTTATTGGAAAAGGAGGATTCGGGAAAGTTTACCTTGGCACTTTAGAAGATACTTCTCAAGTTGCAGTAAAATTACTTTCAGAATCATCAAAGCAAGGATACAAGGAGTTTCAGTCAGAGGTTCAGCTCTTAACGGTTGTTCACCATAGAAACTTGGTTTTACTTGTTGGATATTGCCATGAAAACAACATAATGGCATTGATTTATGAATATGTGGATAATGGGGACCTTGCCCAGCTATTATCAGAGAAAAACTCAAATGTTTTGAAGTGGAATGAGAGGCTTCAAATTGCAATTGACGCAGCAAAAGGATTGGAATACCTTCATGCTGGTTGCAGTACTCCTATAATCCATCGAGACTTGAAGCCATCCAACATTCTATTAAATAAATCTATGATAGCCAAGATTGCTGATTTTGGACTCTCTAGAGTATTTGTCAATGAAAGCGACACCCATCTATCAACTCAACCAGCTGGTACTCCTGGTTATATTGATCCTAAATTTCAAAGATCTGGAAAACTAACCAAGAAAAGTGATATTTATAGTTTTGGAATGATCCTTCTTCAACTAATAACGGGTCGCCCTCCAATAAATAGAGGACCTGAGGATATCAGTTTCATTGTTGATTGGATTCAACCTAAAATTGAATGTGGGGATATTGAAGGCATTGTTGATCCAAGACTAGCTGCAGGATTCAGTGTTAATTCAACATGGAAAGCTGTTGAAGTAGCAATTTCATGTGTGTTACCACCACCATCCCAGAGGCCAAACATAAGTTACATATTGCGAGAACTACAAGAATGTCTGGCTTTGGAGATGGGAATAAATGACATTATGTCCAGAAATTCATGTGATTATAGTGGCAACACTGAATTAATCACTGTTCTCTCTGCTAGGTAG 1749 0.3739 MKTTISWILALLLLVPFFVIVADAANNTGFISIDCGASGDYVDAITGIWYQTDEGFIESGSNREIPAIFKFINELPYMGRQLKTFRSFPEGERNCYTLRPIKQKQKYLIRASFAYQNFDYKNKFPKYLRSSRLKGQISESFALLKNLEYLDLSNNELIGELPEFLATLPNLKFINMNGNKLSGSIPRALKENANLMFSVANNPGQFQLDSCDDNQRKFVIIPLIITSITVIILIAILSVMIWRLRKNRHDLSTNKYLKMEIPKRKNREFSYSQVLQITSNFKTLIGKGGFGKVYLGTLEDTSQVAVKLLSESSKQGYKEFQSEVQLLTVVHHRNLVLLVGYCHENNIMALIYEYVDNGDLAQLLSEKNSNVLKWNERLQIAIDAAKGLEYLHAGCSTPIIHRDLKPSNILLNKSMIAKIADFGLSRVFVNESDTHLSTQPAGTPGYIDPKFQRSGKLTKKSDIYSFGMILLQLITGRPPINRGPEDISFIVDWIQPKIECGDIEGIVDPRLAAGFSVNSTWKAVEVAISCVLPPPSQRPNISYILRELQECLALEMGINDIMSRNSCDYSGNTELITVLSAR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3707g00002 582 PANTHER OS07G0107800 PROTEIN-RELATED 31 121 - -
Pral3707g00002 582 SMART serkin_6 279 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3707g00002 582 CDD STKc_IRAK 285 550 - -
Pral3707g00002 582 Gene3D Phosphorylase Kinase; domain 1 261 354 - -
Pral3707g00002 582 ProSiteProfiles Protein kinase domain profile. 279 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3707g00002 582 Pfam Protein kinase domain 282 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3707g00002 582 SUPERFAMILY Protein kinase-like (PK-like) 258 548 IPR011009 -
Pral3707g00002 582 Gene3D Transferase(Phosphotransferase) domain 1 355 565 - -
Pral3707g00002 582 Pfam Leucine Rich repeats (2 copies) 145 184 IPR025875 -
Pral3707g00002 582 Pfam Malectin-like domain 33 126 IPR024788 -
Pral3707g00002 582 ProSiteProfiles Leucine-rich repeat profile. 146 169 IPR001611 GO:0005515
Pral3707g00002 582 Gene3D Ribonuclease Inhibitor 79 203 IPR032675 -
Pral3707g00002 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Pral3707g00002 582 FunFam Leucine-rich repeat receptor-like protein kinase 256 354 - -
Pral3707g00002 582 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Pral3707g00002 582 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 355 559 - -
Pral3707g00002 582 SUPERFAMILY L domain-like 128 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3707g00002 Pral-Chr3707 20180 26289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3707g00002 128 555 Receptor kinase-like Gene Family AT1G51850 46.652 4.72e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral3707g00002 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3707g00002 - - pcin:129289942 558.14