Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3707g00001 ATGAAGAAATCGATTCTTGCATTGCTTGTGTTGGTTTCCTTTATCATTGTGGCGGATGCTGCTAATCGTACAGGCTTCATAAGTATAGATTGTGGAGCAAAGAGAGATTATGTTGATGAATTAACAGGGATTTGGTCCAAGGACGATGTTTATGACCGTTTGTGGCATACATATATAAAGAATAGTCAGTGGAATGTCTTAGAAACAGATGGACAAGTAAAAGTCGAAAATTCCAATTATGAGCTTCCATCAGAAATATTAGTCACAGCATGTCAAGCCCCGAATAATTCCAATCTCTTATCTGAGAGTTGGAGTCTTGATGTAGCAGAACAATTTTATCTGTTTCTTCACTTTGCTGAAATTCAAAAGCTTCCTTCTGGCCAAAAGAGGATTATCAATGTCACTTTTAATTATGAAAATTCCCTCTACGAAGAACTTACCCTTGAATATTTGAAACCCGTCACCCTAAATTCCAACATCACTACAAATAACGTTAGATTCAGAATTAGGGCAACAGATGATTCTTATGCCCCTCCTATCCTCAATGCCTTTGAGATTTTTAAAGTCTTCCCCCACACCAAATTCCCCAACGGACCCACAAGACGGCACTTGGGGTCAAGCAAACTCAAAGGACAAATATCTGAATCCTTCGCGCGTTTGAAAAATTTGGAGTGCTTTGATGTGACGGGAAACAAACTCACGGGTTCAATTCCCAAGGCTTTTAGTGAAAATGCTAATTTAAGGCTCAGTGTAGCCAACAATGCAGGTCTCTATCAGTTGGATTCATGCAACAAAGAACGCACGTTTGTTATTCCTCTTGTTACATCAATTACAGTCTTTACCCTAATTGCCGTTCTTTCTTTGGTGGTTTGGAGACTGAGAAAGAGAAGACAAGATTCGTCCACAAATAAATACTTGAAGATGGAGATTCCAAAACGAAAGAATCGAGAATTCTCTCACTCACAAGTTCTGCGGATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGATTCGGGAAAGTTTACCTTGGGACTCTAGAAGATAATTCTCAAGTTGCAGTAAAATTACTTTCAGAATCATCAAAGCAAGGATATAAGGAGTTTCAATCAGAGGCTCAGCTCTTGACAGTTATTCATCATAGAAACTTGGTTTCACTTGTTGGGTATTGCCATGGAAACAATATCATGGCCTTGATTTATGAATATGTGGATAATGGGGACCTCGGCCAATTATTATCAGAGAAAAACTCAAATATTTTGGGGTGGAAACAGAGACTTGAAGTAGCAATTGACGCAGCGAAAGGATTGGAATACCTTCACACTGGTTGTAATACTCCTATAATCCACCGAGACTTGAAACCATCCAACATTTTATTGAATAAATCCATGGTAGCTAAGATTGCTGATTTTGGACTGTCTAGAGTATTTACAAATGAAAAAGATACTCATCTATCAACTCAACCAGCCGGTACTCCTGGTTACATCGATCCTGAATTTCAAAGATCAGGAAAACTAAATAAGAAAACTGATATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACGGGTCGTCCCCCAATAAAGAGAGGACCTGAGGATATCAGTTTCATTATTGATTGGATTCAACCGAAAATTGAAAGTGGGGATATTGAAGGCATTGTTGATCCAAGATTAGCTGCAGAATTCAGTCTTAACTCAACATGGAAAGCTGTTGAAGTAGCAATGTCATGCGTGTTACCACCACCAACCCAAAGGCCAACCATAAGTTACATATTGCGAGAACTACAAGAATGTCTAGCTTTGGAGATGGGAATACATGACATGATGCCAAGAAATTCATGTGATTATAGTGGCAATATTCGATTCCATCGCTATGTGTTCAAGGAAGACGAAGACTTGTCAATTGCCATTGGCAAGAGTTCGAAGAAGGAAGATGGAGATCTGAACACAGATATGAGTCTCCGTCGTAGCATCCTCAATTTTGCCTCTTTCCACCTTCATTACCGTCGCAAGAGGATAGTCGATATGTAA 2037 0.3888 MKKSILALLVLVSFIIVADAANRTGFISIDCGAKRDYVDELTGIWSKDDVYDRLWHTYIKNSQWNVLETDGQVKVENSNYELPSEILVTACQAPNNSNLLSESWSLDVAEQFYLFLHFAEIQKLPSGQKRIINVTFNYENSLYEELTLEYLKPVTLNSNITTNNVRFRIRATDDSYAPPILNAFEIFKVFPHTKFPNGPTRRHLGSSKLKGQISESFARLKNLECFDVTGNKLTGSIPKAFSENANLRLSVANNAGLYQLDSCNKERTFVIPLVTSITVFTLIAVLSLVVWRLRKRRQDSSTNKYLKMEIPKRKNREFSHSQVLRITNNFKTLIGEGGFGKVYLGTLEDNSQVAVKLLSESSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHGNNIMALIYEYVDNGDLGQLLSEKNSNILGWKQRLEVAIDAAKGLEYLHTGCNTPIIHRDLKPSNILLNKSMVAKIADFGLSRVFTNEKDTHLSTQPAGTPGYIDPEFQRSGKLNKKTDIYSFGMILLQLITGRPPIKRGPEDISFIIDWIQPKIESGDIEGIVDPRLAAEFSLNSTWKAVEVAMSCVLPPPTQRPTISYILRELQECLALEMGIHDMMPRNSCDYSGNIRFHRYVFKEDEDLSIAIGKSSKKEDGDLNTDMSLRRSILNFASFHLHYRRKRIVDM 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3707g00001 678 PANTHER OS07G0107800 PROTEIN-RELATED 29 194 - -
Pral3707g00001 678 SUPERFAMILY Protein kinase-like (PK-like) 305 597 IPR011009 -
Pral3707g00001 678 FunFam Leucine-rich repeat receptor-like protein kinase 304 403 - -
Pral3707g00001 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral3707g00001 678 Gene3D Transferase(Phosphotransferase) domain 1 404 610 - -
Pral3707g00001 678 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral3707g00001 678 Pfam Malectin-like domain 43 189 IPR024788 -
Pral3707g00001 678 Gene3D Phosphorylase Kinase; domain 1 310 403 - -
Pral3707g00001 678 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3707g00001 678 SUPERFAMILY L domain-like 204 254 - -
Pral3707g00001 678 Pfam Protein tyrosine and serine/threonine kinase 330 597 IPR001245 GO:0004672|GO:0006468
Pral3707g00001 678 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3707g00001 678 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 404 608 - -
Pral3707g00001 678 Gene3D - 24 185 - -
Pral3707g00001 678 CDD STKc_IRAK 334 599 - -
Pral3707g00001 678 Gene3D Ribonuclease Inhibitor 186 266 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3707g00001 Pral-Chr3707 3521 12196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3707g00001 47 624 Receptor kinase-like Gene Family AT2G19230 36.692 6.31e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral3707g00001 PK_Tyr_Ser-Thr 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3707g00001 - - pcin:129289942 540.036