Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3706g00002 ATGGAAATTCTATGCAAAAATGGTTGGTATCATGTTCCACGATCATTCCTTAAAGATGGTGAAAACACATTGGTTTTGTTGGAGGAGATGGAAGAAAATCCATCCTATGTGAATTTCGGAACAGTTAGTGCGAGAGCTGCTTGTGGGAATACTTATAAGAACCTCACATTGGAACTACCTTGCCAGAGCAATTCAATTTCTGCCATTAGATTTGCCAATTTTCGAGATCCTCAAGGCATATATGAAAGCACCAACGATACTGCAACTATAGACAAGGCTTGCCACAGATCATTTCTCTTTTCCTCGTCCTCTAAACTTGAAGACATGAAGAAATCGATTCTTGCATTGCTTGTGTTGGTTTCCTTTATCATTGTGGCGGATGCTGCTAATCGTACAGGCTTCATAAGTATAGATTGTGGAGCAAAGAGAGATTATGTTGATGAATTAACAGGGATTTGGTACCAAACAGATGAAGGCTTCATAGAAAGTGGATCCAATCATGAAATACCACCCATCTTTAACATCAGCAACGATCTTGCATACATGAGGGGTCAGCTAAAAACATTCAGAAGTTTTCCAGAGGGACAAAGGAACTGTTATACTTTGAGACCAATAAAACAAAAGCAGAAGTATCTGATCAGAGCTTCATTTGCTTGTCAGAACTATGACTCAAAAAACGAGTTCCCAAAGTTTGATCTCTACTTGGGGGTCAACTATTGGGCGACAATTGAATTGAATGAAAATAAAACTTTTGGATATAATGAAATAATAATCCAAGAGGTTACCAATGGCATGGTTCAAGTGTGTCTGGTGGACACGGGAGAAGGCAAACCTTTTATGAACACATTGGAACTACGGCCATTGAGAAATTCTCTCTATTCCTCTCCATTTCCCTTATCTCTTTACACAAGAAGAGATTGTGGCCCTTCTTCCAGTATCAACTATGTCAGGTCCAAGGACGATGTTTATGACCGTTTGTGGCATACATATATAAAGAATAGTCAGTGGAATGTCTTAGAAACAGATGGACAAGTAAAAGTCGAAAATTCCAATTATGAGCTTCCATCAGAAATATTAGTCACAGCATGTCAAGCCCCGAATAATTCCAATCTCTTATCTGAGAGTTGGAGTCTTGATGTAGCAGAACAATTTTATCTGTTTCTTCACTTTGCTGAAATTCAAAAGCTTCCTTCTGGCCAAAAGAGGATTATCAATGTCACTTTTAATTATGAAAATTCCCTCTACGAAGAACTTACCCTTGAATATTTGAAACCCGTCACCCTAAATTCCAACATCACTACAAATAACGTTAGATTCAGAATTAGGGCAACAGATGATTCTTATGCCCCTCCTATCCTCAATGCCTTTGAGATTTTTAAAGTCTTCCCACAACCAAATTCCCCAACGGACCCACAAGATGATTCGTCCACAAATAAATACTTGAAGATGGAGATTCCAAAACGAAAGAATCGAGAATTCTCTCACTCACAAGTTCTGCGGATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGATTCGGGAAAGTTTACCTTGGGACTCTAGAAGATAATTCTCAAGTTGCAGTAAAATTACTTTCAGAATCATCAAAGCAAGGATACAAGGAGTTTCAATCAGAGGCTCAGCTCTTGACAGTTATTCATCATAGAAACTTGGTTTCACTTGTTGGGTATTGCCATGGAAACAATATCATGGCCTTGATTTATGAATATGTGGATAATGGGGACCTCGGCCAATTATTATCAGAGAAAAACTCAAATATTTTGAGGTGGAAACAGAGACTTGAAGTAGCAATTGACGCAGCGAAAGGATTGGAATACCTTCACACTGGTTGTAATACTCCTATAATCCACCGAGACTTGAAACCATCCAACATTTTATTGAATAAATCCATGGTAGCTAAGATTGCTGATTTTGGACTGTCTAGAGTATTTACAAATGAAAAAGATACTCATCTATCAACTCAACCAGCCGGTACTCCTGGTTACATCGATCCTGAATTTCAAAGATCAGGAAAACTAAATAAGAAAACTGATATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACGGGTCGTCCCCCAATAAAGAGAGGACCTGAGGATATCAGTTTCATTATTGATTGGATTCAACCGAAAATTGAAAGTGGGGATATTGAAGGCATTGTTGATCCAAGATTAGCTGCAGAATTCAGTCTTAACTCAACATGGAAAGCTGTTGAAGTAGCAATGTCATGCGTGTTACCACCACCAACCCAAAGGCCAACCATAAGTTACATATTGCGAGAACTACAAGAATGTCTAGCTTTGGAGATGGGAATACATGACATGATGCCAAGAAATTCATGTGATTATAGTGGCAATAGTGAGTTAATCACTGTTCTCTCTGCTAGGAAAGGGTTTCTAATGCTGATTCAACTCGGCATATTCCGCTGCTCCTTCTTCATCTTCCTTCTTTTCTCTGCTTCAACCACTCAACTCTGTCATTTGGGTTTGGTTGTACATCTTCATCTTTTGCTTCTAGTTCGATTCCATCGCTATGTGTTCAAGGAAGACGAAGACTTGTCAATTGCCATTGGCAAGGTTCGAAGAAGGAAGATGGAGATCTGA 2634 0.3869 MEILCKNGWYHVPRSFLKDGENTLVLLEEMEENPSYVNFGTVSARAACGNTYKNLTLELPCQSNSISAIRFANFRDPQGIYESTNDTATIDKACHRSFLFSSSSKLEDMKKSILALLVLVSFIIVADAANRTGFISIDCGAKRDYVDELTGIWYQTDEGFIESGSNHEIPPIFNISNDLAYMRGQLKTFRSFPEGQRNCYTLRPIKQKQKYLIRASFACQNYDSKNEFPKFDLYLGVNYWATIELNENKTFGYNEIIIQEVTNGMVQVCLVDTGEGKPFMNTLELRPLRNSLYSSPFPLSLYTRRDCGPSSSINYVRSKDDVYDRLWHTYIKNSQWNVLETDGQVKVENSNYELPSEILVTACQAPNNSNLLSESWSLDVAEQFYLFLHFAEIQKLPSGQKRIINVTFNYENSLYEELTLEYLKPVTLNSNITTNNVRFRIRATDDSYAPPILNAFEIFKVFPQPNSPTDPQDDSSTNKYLKMEIPKRKNREFSHSQVLRITNNFKTLIGEGGFGKVYLGTLEDNSQVAVKLLSESSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHGNNIMALIYEYVDNGDLGQLLSEKNSNILRWKQRLEVAIDAAKGLEYLHTGCNTPIIHRDLKPSNILLNKSMVAKIADFGLSRVFTNEKDTHLSTQPAGTPGYIDPEFQRSGKLNKKTDIYSFGMILLQLITGRPPIKRGPEDISFIIDWIQPKIESGDIEGIVDPRLAAEFSLNSTWKAVEVAMSCVLPPPTQRPTISYILRELQECLALEMGIHDMMPRNSCDYSGNSELITVLSARKGFLMLIQLGIFRCSFFIFLLFSASTTQLCHLGLVVHLHLLLLVRFHRYVFKEDEDLSIAIGKVRRRKMEI 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3706g00002 877 CDD STKc_IRAK 509 774 - -
Pral3706g00002 877 Pfam Protein tyrosine and serine/threonine kinase 505 772 IPR001245 GO:0004672|GO:0006468
Pral3706g00002 877 Gene3D Phosphorylase Kinase; domain 1 486 578 - -
Pral3706g00002 877 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 579 783 - -
Pral3706g00002 877 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3706g00002 877 ProSiteProfiles Protein kinase domain profile. 503 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3706g00002 877 PANTHER OS07G0107800 PROTEIN-RELATED 488 776 - -
Pral3706g00002 877 FunFam Leucine-rich repeat receptor-like protein kinase 480 578 - -
Pral3706g00002 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral3706g00002 877 Pfam Malectin-like domain 137 461 IPR024788 -
Pral3706g00002 877 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Pral3706g00002 877 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Pral3706g00002 877 SUPERFAMILY Protein kinase-like (PK-like) 480 772 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3706g00002 Pral-Chr3706 19504 30575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3706g00002 489 780 Receptor kinase-like Gene Family AT1G51890 50.853 2.89e-102 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral3706g00002 Malectin_like 3.4e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3706g00002 - - pcin:129289942 461.07