Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3705g00012 ATGAAGAAATCGATTCTTGCATTGCATGTGTTGATTTCCTTTATCACTGTGGCGGATGCTGCTAATCGTACAGGCTTCATAAGTATAGATTGTGGAGCAAAGAGAGATTATGTTGATGAATTAACAGGGATTTGGTACCAAACAGATGAAGGCTTCATAGAAAGTGGATCCAATCATGAAATACCACCCATCTTTAACATCAGCAACAATCTTGCATACATGAGGGGTCAGCTAAAAACATTCAGAAGTTTTCCAGAGGGACAAAGGAACTGTTATACTTTGAGACCAATAAAACAAAAGCAGAAGTATCTGATCAGAGCTGCATTTGCTTATCAGAACTATGACTCAAAAAACGAGTTCCCAAAGTTTGATCTCTACTTGGGGGTCAACTATTGGGCGACAATTGAATTGAATGAAAATAAAACTTTTGGATATAATGAAATAATAATCCAAGAGGTTACCAATGGCATGGTTCAAGTGTGTCTGGTGGACATGGGAGAAGGCAAACCTTTTATTAACACATTGGAACTACGGCCATTGAGAAATTCTCTCTATTCCTCTCCATTTCCCTTATCTCTTTACACAAGAAGAGATTGTGGCCCTTCTTCCAGTATCAACTATGTCAGGTCCAAGGACGATGTTTATGACCGTTTGTGGCATACATATATAAAGAATAGTCAGTGGAATGTCTTAGAAACAGATGGACAAGTAAAAGTCGAAAATTCCAATTATGAGCTTCCATCAGAAATATTAGTCACAGCATGTCAAGCCCCGAATAATTCCAATCTCTTATCTGAGAGTTGGAGTCTTGATGTAGCAGAACAATTTTATCTGTTTCTTCACTTTGCTGAAATTCAAAAGCTTCCTTCTGGCCAAAAGAGGATTATCAATGTCACTTTTAATTATGAAAATTCCCTCTATGAAGAACTTACTCTTGAATATTTGAAACCCGTCACCCTAAATTCCAACATCACTACAAGTAACGTTATATTCACAATTAGGGCAACAGATGATTCTTATGCCCCTCCTATCCTCAATGCCTTTGAGATTTTTAAAGTCTTCCCACAACCAAATTCCCCAACGGACCCACAAGACGATTCGTCCACAAATAAATACTTGAAGATGGAGATTCCAAAACGAAAGAATCGAGAATTCTCTCACTCACAAGTTCTGCGGATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGATTCGGAAAAGTTTACCTTGGGACTCTAGAAGATAATTCTCAAGTTGCAGTAAAATTACTTTCAGAATCATCAAAGCAAGGATATAAGGAGTTTCAATCAGAGGCTCAGCTCTTGACAGTTATTCATCATAGAAACTTGGTTTCACTTGTTGGGTATTGCCATGGAAACAATATCATGGCCTTGATTTATGAATATGTGGATAATGGGGACCTCGGCCAATTATTATCAGAGAAAAACTCAAATATTTTGGGGTGGAAACAGAGACTTGAAGTAGCAATTGACGCAGCAAAAGGATTGGAATACCTTCACACTGGTTGTAATACTCCTATAATCCACCGAGACTTGAAACCATCCAACATTTTATTGAATAAATCCATGGTAGCTAAGATTGCTGATTTTGGACTGTCTAGAGTATTTACAAATGAAAAAGATACTCATCTATCAACTCAACCAGCCGGTACTCCTGGTTACATCGATCCTGAATTTCAAAGATCAGGAAAACTAAATAAGAAAACTGATATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACGGGTCGTCCCCCAATAAAGAGAGGACCTGAGGATATCAGTTTCATTATTGATTGGATTCAACCGAAAATTGAAAGTGCGGATATTGAAGGCATTGTTGATCCAAGATTAGCTGCAGAATTCAGTCTTAACTCAACATGGAAAGCTGTTGAAGTAGCAATGTCATGCGTGTTACCACCACCAACCCAAAGGCCAACCATAAGTTACATATTGCGAGAACTACAAGAATGTCTAGCTTTGGAGATGGGAATACATGACATTATGCCCAGAAATTCATGTGATTATAGTGGCAATATTCTATTGCATCGCTATGTGTTCAAGGAAGACGAAGACTTGTCAATTGCCATTGGCAAGGGTTCGAAGAAGGGAGATGGAGATCTGAAAACAGATATGAGTCTCCGTCGTAGCATCCTCAATTTTGCCTCTTTCCACCATCATTACCGTCGCAAGAGGATAGTCGATATGGGGCCGCTGGTATTGGCTAATCCCACAAAAAGTGAGCAGAATTATGACTCCAAGAACCAGTTTCCAAAGTTTGATGTTTACCTGGGAGTCGATTTTTGGACCACAATTGAATTGGGTGCAAAGAATTTTGCTTACGTGGAAGTAACAATCGAGGAGGTTACCAACGACTGGTACAAGGACGATACGTACGATCGCCTGTGGCGCATATATGATGATTCTGATTGGGATGTCTTAAAAACTCCACTTCCTTCTGACCAAAAGAGGATCATCAGTGTCACTTTTGATGATGATGATGATGATGAAAATTCCCTCTCTCAAGAACTGACTCCTGAATAA 2571 0.3878 MKKSILALHVLISFITVADAANRTGFISIDCGAKRDYVDELTGIWYQTDEGFIESGSNHEIPPIFNISNNLAYMRGQLKTFRSFPEGQRNCYTLRPIKQKQKYLIRAAFAYQNYDSKNEFPKFDLYLGVNYWATIELNENKTFGYNEIIIQEVTNGMVQVCLVDMGEGKPFINTLELRPLRNSLYSSPFPLSLYTRRDCGPSSSINYVRSKDDVYDRLWHTYIKNSQWNVLETDGQVKVENSNYELPSEILVTACQAPNNSNLLSESWSLDVAEQFYLFLHFAEIQKLPSGQKRIINVTFNYENSLYEELTLEYLKPVTLNSNITTSNVIFTIRATDDSYAPPILNAFEIFKVFPQPNSPTDPQDDSSTNKYLKMEIPKRKNREFSHSQVLRITNNFKTLIGEGGFGKVYLGTLEDNSQVAVKLLSESSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHGNNIMALIYEYVDNGDLGQLLSEKNSNILGWKQRLEVAIDAAKGLEYLHTGCNTPIIHRDLKPSNILLNKSMVAKIADFGLSRVFTNEKDTHLSTQPAGTPGYIDPEFQRSGKLNKKTDIYSFGMILLQLITGRPPIKRGPEDISFIIDWIQPKIESADIEGIVDPRLAAEFSLNSTWKAVEVAMSCVLPPPTQRPTISYILRELQECLALEMGIHDIMPRNSCDYSGNILLHRYVFKEDEDLSIAIGKGSKKGDGDLKTDMSLRRSILNFASFHHHYRRKRIVDMGPLVLANPTKSEQNYDSKNQFPKFDVYLGVDFWTTIELGAKNFAYVEVTIEEVTNDWYKDDTYDRLWRIYDDSDWDVLKTPLPSDQKRIISVTFDDDDDDENSLSQELTPE 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3705g00012 856 MobiDBLite consensus disorder prediction 835 856 - -
Pral3705g00012 856 Gene3D Transferase(Phosphotransferase) domain 1 471 676 - -
Pral3705g00012 856 ProSiteProfiles Protein kinase domain profile. 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3705g00012 856 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Pral3705g00012 856 Pfam Protein tyrosine and serine/threonine kinase 397 664 IPR001245 GO:0004672|GO:0006468
Pral3705g00012 856 Gene3D Phosphorylase Kinase; domain 1 378 470 - -
Pral3705g00012 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Pral3705g00012 856 SMART serkin_6 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3705g00012 856 FunFam Leucine-rich repeat receptor-like protein kinase 372 470 - -
Pral3705g00012 856 PANTHER OS07G0107800 PROTEIN-RELATED 380 668 - -
Pral3705g00012 856 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 471 674 - -
Pral3705g00012 856 Pfam Malectin-like domain 29 353 IPR024788 -
Pral3705g00012 856 CDD STKc_IRAK 401 666 - -
Pral3705g00012 856 SUPERFAMILY Protein kinase-like (PK-like) 372 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3705g00012 Pral-Chr3705 112537 124605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3705g00012 381 672 Receptor kinase-like Gene Family AT1G51890 50.512 2.25e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral3705g00012 Malectin_like 8.5e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3705g00012 - - pcin:129289942 452.595