Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3704g00008 ATGAGGAAGAAACTCGACACTCGTTTCCCTGCCGCTCGGATTAAGAAAATTATGCAATCAGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAGCTCTTCCTGCAAGATTTATGTGATCGGACGTATGAAATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTTTCATTTAAAACAATGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCACGTTACTTCTGGAGATGACCGCACTGTCTGTAAGAGAAGGAAGGTTGATGATGATGGAAATGACAGTGACGATGATGCCAAAAGAAATAAGATGGCAGAAAATGTACATCATGCTGGTGGTAGGGGAAGGGGACGGGGCAGAGGCAGGGGCCGTGGCCGAGTAAGTAGAACAACAGATCGAGAGATTAATGCACATGTCAAATCTGAAGATGATCATCATAATGATTCATTGATGCGCACTCACAGCAATGAAAGCATGGAAATTGGTACGGAACATGACGTGAAGCCTTCCGTTGGCAAGACATCAGAAGCATGCTTTAGAAATTTTGACTTAAATATGGATCCCGTGGAGGAGAACGGATATTCACCAACCAGCATGGCTCTTGTCCAACCTTGTCCATCAGAAAAACCAACGTCAATTTGTCCATCTCAAAAACCAACGACAACTTGTCCATCTGAAAAGCCAACCCCAGAACCGAAACACGAAGAAATCCCAGGCTGGTCGCTGTCTGATGTGGAAAAAATGGCCATTGATCCTGTTCAACTGGTCAACATGAATGGGAGGTTGGATGAAGATGATGAAGATTATGATGAAGAATGTTGA 882 0.4331 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHVTSGDDRTVCKRRKVDDDGNDSDDDAKRNKMAENVHHAGGRGRGRGRGRGRGRVSRTTDREINAHVKSEDDHHNDSLMRTHSNESMEIGTEHDVKPSVGKTSEACFRNFDLNMDPVEENGYSPTSMALVQPCPSEKPTSICPSQKPTTTCPSEKPTPEPKHEEIPGWSLSDVEKMAIDPVQLVNMNGRLDEDDEDYDEEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3704g00008 293 MobiDBLite consensus disorder prediction 105 169 - -
Pral3704g00008 293 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Pral3704g00008 293 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pral3704g00008 293 MobiDBLite consensus disorder prediction 145 169 - -
Pral3704g00008 293 FunFam dr1-associated corepressor homolog 1 86 - -
Pral3704g00008 293 MobiDBLite consensus disorder prediction 226 244 - -
Pral3704g00008 293 MobiDBLite consensus disorder prediction 226 260 - -
Pral3704g00008 293 MobiDBLite consensus disorder prediction 105 133 - -
Pral3704g00008 293 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pral3704g00008 293 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3704g00008 Pral-Chr3704 104846 108498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3704g00008 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 69.403 2.94e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral3704g00008 CBFD_NFYB_HMF 1.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3704g00008 K21752 - gmx:100779786 306.219