Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3703g00016 ATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAACGGCTTCAAACACAAGTTAGGTGAAGGAGGCTATGGCTATGTGTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCCATCAAGTTACTGGCGAAGTCCAAAGCCAATAATGCACAAGATTTCATAAGCGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGCACCGAAAGAAGTAAACGAGCTCTTGTTTATGAATTTATGCCTAATGGATCACTTGACAAGTACATCTTCTTGGAGAGACAAAGCAACACGCCCATCAATTACGAGAAAATGTTTAACATTTCTCTTGGGATTGCTCGAGGAATTGAGTATTTACATCGAGGATGTGATATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCGGATTTCAGATTGGCTAAGTTGTACCCATTAGATAATAGTATTGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCCGATGTTTATAGTTTTGGGATGCTACTAATGGAAATGGCCGGCAGAAAGAAGAACTCGAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCAAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCGAAAAAGATGATCATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCTTCGATGAAGAATGTGTTAGAGATGCTTGAGGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCCAAATTTATGTAACTTGGTGA 909 0.3938 MPIKYSYSEIKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAIKLLAKSKANNAQDFISEVATIGRIHHVNVVQLIGFCTERSKRALVYEFMPNGSLDKYIFLERQSNTPINYEKMFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKISDFRLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMAGRKKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPPQIYVTW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3703g00016 302 Gene3D Transferase(Phosphotransferase) domain 1 91 294 - -
Pral3703g00016 302 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 296 IPR045874 GO:0004672
Pral3703g00016 302 Gene3D Phosphorylase Kinase; domain 1 2 90 - -
Pral3703g00016 302 ProSiteProfiles Protein kinase domain profile. 15 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00016 302 FunFam PR5-like receptor kinase 91 295 - -
Pral3703g00016 302 Pfam Protein kinase domain 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00016 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pral3703g00016 302 PIRSF ILK 4 293 - -
Pral3703g00016 302 SMART serkin_6 15 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00016 302 FunFam serine/threonine-protein kinase PBS1-like 1 90 - -
Pral3703g00016 302 SUPERFAMILY Protein kinase-like (PK-like) 4 285 IPR011009 -
Pral3703g00016 302 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3703g00016 Pral-Chr3703 173354 174414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3703g00016 4 295 Receptor kinase-like Gene Family AT5G38280 53.488 1.25e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3703g00016 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3703g00016 - - tpra:123914142 417.157