Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3703g00011 ATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAGTGGCTTCAAACACAAGTTGGGTGAAGGAGGCTATGGTTATGTGTATAAAGGTAAGCTTCGAAGCAATCGTGATGTAGCCGTCAAGTTACTGACAAAGTCCAAAGCCAATAATGCACAAGATTTCATTAGTGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGCACTGAAAGAAGTAAGCGAGCTCTTGTTTATGAATTTATGCCTAATGGATCACTTGACAAGTACATATTCTTGGAGAGACAAAGCAACACGCCCCTCAATTACAAGAAAATATTTAACATTTCTCTTGGGATTGCTCGAGGAATTGAGTATTTACATCGAGGATGTGATATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCGGATTTCGGATTAGCTAAGTTGTATCCATTAGATAATAGTATTGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCTGATGTTTATAGTTTTGGGATGCTACTGATGGAAATGGCTGGCAGAAGGAAGAACTCAAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCAAAGAAGATGATCATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCGATGAAGAATGTGTTAGAGATGCTTGAGGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 891 0.3883 MPIKYSYSEIKKMTSGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLTKSKANNAQDFISEVATIGRIHHVNVVQLIGFCTERSKRALVYEFMPNGSLDKYIFLERQSNTPLNYKKIFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3703g00011 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pral3703g00011 296 ProSiteProfiles Protein kinase domain profile. 15 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00011 296 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 291 IPR045874 GO:0004672
Pral3703g00011 296 SUPERFAMILY Protein kinase-like (PK-like) 4 285 IPR011009 -
Pral3703g00011 296 FunFam serine/threonine-protein kinase PBS1-like 1 90 - -
Pral3703g00011 296 FunFam PR5-like receptor kinase 91 294 - -
Pral3703g00011 296 PIRSF ILK 4 292 - -
Pral3703g00011 296 Gene3D Phosphorylase Kinase; domain 1 2 90 - -
Pral3703g00011 296 Gene3D Transferase(Phosphotransferase) domain 1 91 293 - -
Pral3703g00011 296 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Pral3703g00011 296 Pfam Protein kinase domain 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00011 296 SMART serkin_6 15 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3703g00011 Pral-Chr3703 135384 136392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3703g00011 4 295 Receptor kinase-like Gene Family AT5G38280 53.488 9.12e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3703g00011 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3703g00011 - - tpra:123914142 421.009