Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3703g00006 ATGATGTCTGATGTGCCAGAGTCATGCAGAATAGATTTGATAGTGAAGGTGGTGCCATGGGGACCAATGACGTGTAATGAGAGTTGTTCGTATCCGCAAGTTCAGAGGCAGGAGGTAAATGGGATTGAGGTCAGATGGCGCCCAAATCGTTGTGGAGTGTGGGACGGAGGGCGGCAACCTAGCTGTTCGTTTGAAAACGCCACTAATATGGTCCTTTGTTCTCAGGATGCGGCAGTTTCTCTTTCGGACTCTATTTCCGCCCTCCTCTTTCTTAGCGTGACAGCTACAGTAACTCTCTGGTCTGCAGCTAAATTTGTACTGGGTGGCCCTTGTGCTTTAATATTCTTGATTATCCGATGGAGAAGAAGGCATCAATCTTATTATGACAATGTTGAGGACTTCCTCCGAAATAACAGTAACCTGATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAATGGCTTCAAACACAAGTTGGGTGAAGGAGGCTATGGTTATGTGTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCCGTCAAGTTACTGACAAAGTCCAAAGCCAATAATGCACAAGATTTCATAAGCGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGCACTGAAAGAAATAAGCGAGCTCTTGTTTATGAATTTATGCCTAATGGATCACTTGACAAGTACATATTCTTGGAGAGACAAAGCAACACGCCCATCAATTACGAGAAAATATTTAACATTTCTCTTGGGATTGCTCGAAGAATTGAGTATTTACATCAAGGATGTGATATGCAAATTCTACACTTTGATATCAAACCTCACAATATTCTTCTTGATGAAAATTTTAATCCAAAGATTTCAGACTTTGGATTGGCTAAGTTGTACCCATTAGATCATAGTATCGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTAAATTCTTGTACAAGAACATTGGAAGAATATCACATAAAGCTGATGTTTATAGTTTTGGGATGCTACTAATGGAAATGGCTGGCAGAAGGAAGAACTCGAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGACGAGGAAAGAGGAATTGCAAAGAAGATGATTATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCCATGAAGAATGTGTTAGAGATGCTTGAAGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 1314 0.411 MMSDVPESCRIDLIVKVVPWGPMTCNESCSYPQVQRQEVNGIEVRWRPNRCGVWDGGRQPSCSFENATNMVLCSQDAAVSLSDSISALLFLSVTATVTLWSAAKFVLGGPCALIFLIIRWRRRHQSYYDNVEDFLRNNSNLMPIKYSYSEIKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLTKSKANNAQDFISEVATIGRIHHVNVVQLIGFCTERNKRALVYEFMPNGSLDKYIFLERQSNTPINYEKIFNISLGIARRIEYLHQGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDHSIVSLTNARGTFGYMAPKFLYKNIGRISHKADVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3703g00006 437 ProSitePatterns Protein kinases ATP-binding region signature. 162 184 IPR017441 GO:0005524
Pral3703g00006 437 Gene3D Transferase(Phosphotransferase) domain 1 232 434 - -
Pral3703g00006 437 SUPERFAMILY Protein kinase-like (PK-like) 137 426 IPR011009 -
Pral3703g00006 437 Gene3D Phosphorylase Kinase; domain 1 131 231 - -
Pral3703g00006 437 SMART serkin_6 156 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00006 437 FunFam serine/threonine-protein kinase PBS1-like 124 231 - -
Pral3703g00006 437 Pfam Protein kinase domain 159 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00006 437 ProSiteProfiles Protein kinase domain profile. 156 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00006 437 FunFam PR5-like receptor kinase 232 435 - -
Pral3703g00006 437 PANTHER RUST RESISTANCE KINASE LR10-RELATED 125 432 IPR045874 GO:0004672
Pral3703g00006 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3703g00006 Pral-Chr3703 63470 65743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3703g00006 145 436 Receptor kinase-like Gene Family AT5G38280 53.821 1.62e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3703g00006 Pkinase 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3703g00006 - - tpra:123914142 504.982