Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3703g00005 ATGTTAAAAGAAACCTTCATCATAATCATCTTCCTTGGCTCCTTTGCTGCATATACATTCAATCCTAATTCTGATACTGATTTCTTTATAAAATCATCATTTAGTGAATCCTGCGGACATGTCTTCAACATCCCCACAAATACATATTATAAATATGGCGACTGCTACGATCCCAGCTATACAGTAAGCTGCGAGAACAACAGAAGTGTGTTGTCTGTAAACTATGGAAGGCGCTTGGTGCAGGCCGTTTATGCCACTAACTCCACAAATCTCCAATCCATTACCTCCGGACTTGACATCAACAATTGCTACGCGATCTCTCGTCATTCTCTCACATACAGCAACTTCTTCAACCACAATTTCAAAGCCAAAGAGAGGAAACCAAGCAACAAAAAATACCATTATCATGTGGGCGGATTAGTGTTTGTCAGCTGCCAAAATCCAGTTCACTCTCCTTCGTATGCTGAAATTGTGGCTCCTTGTTCTAGTGAAGCACCAAAAACTCGTTATTCTTATGTGCTGACGGGGGATCCAAGTGTATCTGATGTGGAAGAGTCGTGCAAAATAGATATGTTGGTGAAGGTTTTGCCATGGGGGCCAATGAGATGTAATAAGAATTGTTCATATCCAAAAGTTCAGAGGGAAGAGGTAAAGGAGATTCACATCAAATGGATTGCTGATCGTTGTGGAGTGTGGGATGGAGGGCAACCAAACTGCTGGTTTGAAAATGCCACTAATATGGTTCTTTGTCATCGTCCACTTGATCTTGCAACGGTTTCAGTGACTTACTGGTCTGCAGCTAAATTTGTATTGGGTACACCTTTTGTTTTAATATTCTTGATTCTTCGATGGAGAAGAAGGCATCAATCTTATTATGACAATGTCGAGGACTTCCTCCGAAATAATAGTAACCTGATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAACGGCTTCAAACACAAGTTAGGTGAAGGAGGCTACGGCTATGTGTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCCATCAAGTTACTGGCGAAGTCCAAAGCCAATAGAGCACAAGATTTCATAAGCGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGCACTGAAAGAAATAAGCGGGCTCTTGTTTATGAATTTATGCCTAATGGATCTCTCGACAAGTACATATTCTTGGAGAGACAAGGGAATGTGCCCATCAATCATGACAAAATATTTAACATTTCTCTTGGGGTTGCCCGAGGAATTGAATATTTACATCGAGGATGTGACGTGCAAATTTTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCGGATTTCGGATTGGCTAAGTTGTACCCATTAGATAATAGTATCGTGTCTTTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCTGATGTTTATAGTTTTGGGATGCTACTAATGGAAATGGCTAGCAGAAGGAAGAACTCGAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCAAAGAAGATGATTATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCCATGAAGAATGTGTTAGAGATGCTTGAAGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 1806 0.4025 MLKETFIIIIFLGSFAAYTFNPNSDTDFFIKSSFSESCGHVFNIPTNTYYKYGDCYDPSYTVSCENNRSVLSVNYGRRLVQAVYATNSTNLQSITSGLDINNCYAISRHSLTYSNFFNHNFKAKERKPSNKKYHYHVGGLVFVSCQNPVHSPSYAEIVAPCSSEAPKTRYSYVLTGDPSVSDVEESCKIDMLVKVLPWGPMRCNKNCSYPKVQREEVKEIHIKWIADRCGVWDGGQPNCWFENATNMVLCHRPLDLATVSVTYWSAAKFVLGTPFVLIFLILRWRRRHQSYYDNVEDFLRNNSNLMPIKYSYSEIKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAIKLLAKSKANRAQDFISEVATIGRIHHVNVVQLIGFCTERNKRALVYEFMPNGSLDKYIFLERQGNVPINHDKIFNISLGVARGIEYLHRGCDVQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMASRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMIIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPP 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3703g00005 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Pral3703g00005 601 SMART serkin_6 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00005 601 Gene3D Phosphorylase Kinase; domain 1 296 395 - -
Pral3703g00005 601 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pral3703g00005 601 PANTHER RUST RESISTANCE KINASE LR10-RELATED 289 596 IPR045874 GO:0004672
Pral3703g00005 601 FunFam PR5-like receptor kinase 396 599 - -
Pral3703g00005 601 FunFam serine/threonine-protein kinase PBS1-like 288 395 - -
Pral3703g00005 601 Pfam Protein kinase domain 323 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00005 601 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Pral3703g00005 601 ProSiteProfiles Protein kinase domain profile. 320 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00005 601 Gene3D Transferase(Phosphotransferase) domain 1 396 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3703g00005 Pral-Chr3703 58368 60692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3703g00005 309 600 Receptor kinase-like Gene Family AT5G38280 52.824 4.59e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3703g00005 Pkinase 3.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3703g00005 - - tpra:123914142 541.962