Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3703g00004 ATGAAACGGCATAGCCGATTGGCCATCCTATTCTTTTTCTTCTGCGTCTTGACTACATTCACTCAACCACACTTCCCTGATCCATGCACGGTAACAAGTTGCGGGGTTGATGGACCTGCCATTCGATTCCCCTTTAGGCTCAAAGGAAAACAGCCAGAATGGTGTGCATATAATCCTGGCTTTGATCTTTACTGTAATGAAACAAACCACACGGTGCTCGAGCTGCCCTTCTCTGTCAAGGTTATCGTACGCGACATTGACTATAAAAAACAATTCTTTGCTGTGTCTGACCCTGATGGATGCCTTGCTCATCTCAATTTATCTGCGTCGCCTTTTCGGTCAAATGATTATTATGACTCAAGCCGAAATGCGATATTCAATTGCTCAGGGACGTCTCGTAGAGATTCAAATCAATTTCCAAAATTGGGAAACTTCTCTTGTCTCGATGTTGCCGGCTATGAGGTTTTAGCTGTACCATACGTAGCGGATATCATAGACTATCCTCTTCTATCATGCACGAGAATTCCTGGTTATGCATCAGTCCCCGATTCATTTTTCTATCACAATGAGCTCATATATCTATCTTGGCTCGAACCAGATTGCAGAAAGTGTGAGGACCATGGAGGGCAGTGTAGATTGACAGAAAACAAAGTTGAACGTGAACCTGAATGTTTCCAAAACCCTCATACAGGTCCATCAAAACAAATAGTACTCACTGGTGAAATCCTAGGCCCGTTCCTGCTCATGTTTGTTGGGTTTGTTGTTTATTGGGTTACTGCAGCTAGCCTAGAGAGGCAGGGTTACAAAAAAATTAAACTGTTTTTGGAGGATTACAAAGCACTTAGGCCTGCTAGATACTCGTATGCAGATATAAAGAGGATCACTAATCAGTTCAGGGATGAACTTGGACAAGGAGCTTACGGAACTGTCTTTAAAGGGAAGCTATCTAATGAGATTCAGGTGGCTGTCAAGCTTCTCAACACTTCAACTGGGAATGGACAAGAGTTCATCAATGAAATGGAGACCATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGGTTGGCTACTGTGCGGATGGTTTCAAACGAGCTTTGGTTTATGAATTTTTACCCAATAGTTCATTGCAGAAATTCATAACTTCAGCTGATAGGAAGGACCTTTTCCTGGGTTGGGGAAAGCTTCATGATATTGCTCTTGGCATAGCCAAAGGAATTGAGTACCTTCATGAAGATTGTGACAAACGGATCCTCCACTTTGATATCAAACCTCACAACATTCTGTTAGATGACAAATTCACTCCAAAAATATCTGATTTCGGTTTGGCCAAACTCTGTTCTAAGGACCAAAGCATTGTGTCAATGACAACAGCTAGAGGCACTTTGGGCTATATTGCACCAGAAATATTTTCTCGGAACTTTGGCAATGTGTCTTATAAATCAGATGTTTATAGCTATGGAATGTTACTGCTTGAAATGGTTGGAGGAAGGAAAATCACAGATGTCACAGAAGAAAATGGCGAGCAAGTTTACTACCCGCAATGGATTTATAATCTTCTAGAGAACAATGAAGACATACAAATCCATGTGGAAGGAGAGGAGGACACTAAAATTGCAAGGAAGCTATCCATTATTGGACTTTGGTGCATTCAGTGGCATCCAGCAAACCGTCCAACCATGAAAAATGTGGTTCAAATGCTGGAAGGGGACGATGAAAAGCTAATCATGCCTCCTAATCCTTTTGGTTCTTCACATGCAATTAGACCAAGAGCTGCTAATGGAGTAAGGCGGTTGCAACCAGAGTTATCTACCATTTCAGAAATAGAGTGA 1830 0.4197 MKRHSRLAILFFFFCVLTTFTQPHFPDPCTVTSCGVDGPAIRFPFRLKGKQPEWCAYNPGFDLYCNETNHTVLELPFSVKVIVRDIDYKKQFFAVSDPDGCLAHLNLSASPFRSNDYYDSSRNAIFNCSGTSRRDSNQFPKLGNFSCLDVAGYEVLAVPYVADIIDYPLLSCTRIPGYASVPDSFFYHNELIYLSWLEPDCRKCEDHGGQCRLTENKVEREPECFQNPHTGPSKQIVLTGEILGPFLLMFVGFVVYWVTAASLERQGYKKIKLFLEDYKALRPARYSYADIKRITNQFRDELGQGAYGTVFKGKLSNEIQVAVKLLNTSTGNGQEFINEMETMCQIHHVNVARLVGYCADGFKRALVYEFLPNSSLQKFITSADRKDLFLGWGKLHDIALGIAKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDVTEENGEQVYYPQWIYNLLENNEDIQIHVEGEEDTKIARKLSIIGLWCIQWHPANRPTMKNVVQMLEGDDEKLIMPPNPFGSSHAIRPRAANGVRRLQPELSTISEIE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3703g00004 609 SMART serkin_6 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00004 609 FunFam PR5-like receptor kinase 371 578 - -
Pral3703g00004 609 SUPERFAMILY Protein kinase-like (PK-like) 280 568 IPR011009 -
Pral3703g00004 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Pral3703g00004 609 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Pral3703g00004 609 ProSiteProfiles Protein kinase domain profile. 296 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00004 609 Gene3D Transferase(Phosphotransferase) domain 1 371 575 - -
Pral3703g00004 609 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Pral3703g00004 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 268 584 IPR045874 GO:0004672
Pral3703g00004 609 Pfam Protein kinase domain 300 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3703g00004 609 Gene3D Phosphorylase Kinase; domain 1 274 370 - -
Pral3703g00004 609 FunFam serine/threonine-protein kinase PBS1-like 268 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3703g00004 Pral-Chr3703 54284 56495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3703g00004 197 580 Receptor kinase-like Gene Family AT1G66910 44.226 4.36e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3703g00004 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3703g00004 - - tpra:123914140 803.512