Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral36g00007 ATGGGAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTTACAACCATATTAGTGGTGCCATTCCAACTGAAATTGGATTTCTTGATAATATTGTCTATTTGGACTTGTCTAACAACAATCTTAGTGGGATCATTCCATCATCGATAAAAGATCTTCAATATCTCACTTATCTGAACTTGTCTTGTAACAATTTCACTAATGGTGATACAGAATTACTTTGGCCGAAGGAGATACATAAAGGCTCAAATTCTTTGTTGAAAATCATTATTCCTTTGACAATTTTTCTTGTGATCACATGTGTTGTGGGTTTCATCTTATTTAAATCATTCAAAAAGAACAAGAAATCCATAAGTGAGACAAGAGAAGCCAAAAATAGAGATTTGCTTTCCATATGGAACTATGATGGAAAAATTGCATATGAAGATATAATTGATGCAACAGAGGACTTTGACATTAAATATTGTATCGGAACTGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGCAAAATTGTAGCATTGAAAAAGCTTCATAGAAGAGAATATGGAAACACATCTTTTGCTAGGAGTTTTCACAATGAAGTAAAGATGTTGAGTGAAATTCGGCATCGTAATATTGTAAAGCTTTATGGTTTTTGTTTACATCATCAGTGCATGTTCCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGACGATGCTAAAGAGTTGGATTGGAGCAAGAGAGTGAATGCAATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGGTTGTGCTCCTCCAATTATCCATCGAGACATAACAAGTGGTAATGTGTTGTTAAACTCAAACATGGATGCTTTTCTATCTGACTTTGGCACAGCTAGAATCATTGATCCAGATGCATCTAACCAAACTCTTCTAGTTGGTACTTATGGTTACATTGCTCCAGAGCTTGCATACACCTTAGTTGTAACTGAAAAATGTGATGTTTATAGTTTTGGAGTGATGACATTGGAAACAATCATGGGAAGACATCCTGGAGATTTGATATTGTCTTTGTCAAAGACATGTTCTGAAAGCATTTGGCTAAAAGATGTGGTAGACCCACGTATCCCATTGCCATCACGAAAAGATGCACGAGATGTAACTCTTTTGGTAGCAATAGCATTAGCATGCTTAAATCCATCTCCCCAGTCTCGGCCATCAATGAAACTAGTGTTTCAAAGGCTTTTATCCTCCAACCTACCATTAGTCATTCCTTTCAATAATATTACAATCCATCATTTAGTGAATCAAGATGTATAA 1323 0.3568 MGALASLTYLDLSYNHISGAIPTEIGFLDNIVYLDLSNNNLSGIIPSSIKDLQYLTYLNLSCNNFTNGDTELLWPKEIHKGSNSLLKIIIPLTIFLVITCVVGFILFKSFKKNKKSISETREAKNRDLLSIWNYDGKIAYEDIIDATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFARSFHNEVKMLSEIRHRNIVKLYGFCLHHQCMFLIYEYMERGSLFYVLNNDDDAKELDWSKRVNAIKGIANALFYMHHGCAPPIIHRDITSGNVLLNSNMDAFLSDFGTARIIDPDASNQTLLVGTYGYIAPELAYTLVVTEKCDVYSFGVMTLETIMGRHPGDLILSLSKTCSESIWLKDVVDPRIPLPSRKDARDVTLLVAIALACLNPSPQSRPSMKLVFQRLLSSNLPLVIPFNNITIHHLVNQDV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral36g00007 440 SUPERFAMILY Protein kinase-like (PK-like) 133 416 IPR011009 -
Pral36g00007 440 Pfam Leucine Rich repeat 6 19 IPR001611 GO:0005515
Pral36g00007 440 FunFam MDIS1-interacting receptor like kinase 2 229 421 - -
Pral36g00007 440 Gene3D Ribonuclease Inhibitor 1 85 IPR032675 -
Pral36g00007 440 FunFam Leucine-rich repeat receptor protein kinase MSP1 112 228 - -
Pral36g00007 440 Pfam Leucine rich repeat 31 67 IPR001611 GO:0005515
Pral36g00007 440 Pfam Protein kinase domain 154 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral36g00007 440 PRINTS Leucine-rich repeat signature 7 20 - -
Pral36g00007 440 PRINTS Leucine-rich repeat signature 28 41 - -
Pral36g00007 440 PANTHER LEUCINE RICH REPEAT KINASE 2 2 420 - -
Pral36g00007 440 ProSitePatterns Tyrosine protein kinases specific active-site signature. 274 286 IPR008266 GO:0004672|GO:0006468
Pral36g00007 440 Gene3D Phosphorylase Kinase; domain 1 110 228 - -
Pral36g00007 440 Gene3D Transferase(Phosphotransferase) domain 1 229 421 - -
Pral36g00007 440 SUPERFAMILY L domain-like 4 79 - -
Pral36g00007 440 ProSiteProfiles Protein kinase domain profile. 150 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral36g00007 440 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral36g00007 Pral-Chr36 123857 127505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral36g00007 4 66 Receptor kinase-like Gene Family AT4G08850 46.032 3.98e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral36g00007 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral36g00007 - - pcin:129305349 588.186