Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3691g00025 ATGGGAGGCACTTCCCCTTGTGCTTCATGCAAGTTGCTACGACGCCGGTGCGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCGATGACCCTCAAAAGTTCGCCATCGTCCACAAGGTCTTCGGCGCCAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCAGACGCAGTGAGCAGCTTAGTGTATGAAGCAAATGCTAGAGTTCGAGACCCAGTTTATGGGTGTGTTGGGGCCATATCGTATCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAAGCAGAGATCCTGTGCATCCAGATGCAGCAGGAACCAGAACCAGAGCCAGTGATGGAAAACCCAGAACTTGACCCCAATCAGAAACCTTATTCTCTCCAAAACGACATCCCTCCTCATCATCAGTACCTTAACTTTGCGTCTTCCACCAGCAATGTAATTCAGGACTCTCTCCAGAGAGAGAGCTTCTTTGGACACGACATGGTTTCTTAA 519 0.4952 MGGTSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPEPEPVMENPELDPNQKPYSLQNDIPPHHQYLNFASSTSNVIQDSLQRESFFGHDMVS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3691g00025 172 Coils Coil 85 105 - -
Pral3691g00025 172 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Pral3691g00025 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 129 - -
Pral3691g00025 172 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3691g00025 Pral-Chr3691 159521 160176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3691g00025 3 135 AS2 family AT2G30130 82.707 3.68e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3691g00025 LOB 1.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3691g00025 - - cit:102614863 276.944