Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3691g00013 ATGAAGAGCATGAAGGGCTATGAGCCCCGTTCCAGTTCTTCCTGCGCTGCCTGCAAGCTCCTCAAGCGACGCTGCACCCCCACCTGCATCTTCGCCCCCTACTTCCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCTTCGAGGTCCCCGAGGAGCAGCGCGAGGACACCGTCAACTCGCTCGCCTATGAGGCCGACGCCAGGCTGAAAGACCCTGTTTATGGATGCATTGGCGCTATCGCTCTGTTGCAGACCAAGATGGTGGAGCTCCAGCATGACCTCGCCATCGCTCGGGCTCGTCTCGCTCGTTATTCTTCCGCCTCCGCCGCCGCCTCCGACGCCTTCATTAACTTCCCCTCTTCTTCCATCGACGATGCCTTCCCTGCTCACGTGGGTTTGCCCCCCTTCCCCGACTCTTCTTCCTCTTGCTGCGACGTCGACGATGGCTTCTCCTCGTCTCAGGTTCAGTTATCGAGCCGACATGATATGGTGGATGATTTTTTTCAAGCCCCATATATATTCTGA 564 0.5745 MKSMKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLAIARARLARYSSASAAASDAFINFPSSSIDDAFPAHVGLPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMVDDFFQAPYIF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3691g00013 187 Coils Coil 93 113 - -
Pral3691g00013 187 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Pral3691g00013 187 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Pral3691g00013 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3691g00013 Pral-Chr3691 99612 100393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3691g00013 4 151 AS2 family AT3G11090 68.000 2.87e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3691g00013 LOB 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3691g00013 - - gmx:100305534 243.817