Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3691g00011 ATGGGCGACCCTTCATCCCCTCCGTCTCACTCCCCTGAAGCCGCCGCCACCACGCCCACTCACCCTTCTTCTCGCAAAACCAAGGGCAAAGGTGGTCCAGACAACAACAAGTTTAGGTTTCGCGGGGTCAGGCAGCGAAGCTGGGGCAAATGGGTGGCCGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTTGGCACTTTCGCCACCGCTGAAGACGCCGCCCGTGCCTACGACCGCGCCGCCCTCATCCTTTACGGCTCCAGGGCTCAGCTCAACCTTCAGCCTTCTCTGCCTTCCTCTTCCTCCTCCGCTTCCTCCTCCTCTTCTCGTCCCTCCAGTTCTTCCTCCACTCAGACCCTCCGGCCCTTGCTCCCCCGTCCCCCCGCCGCCTCCGCCTTCTTGCCCTACGGCCTTTACAATACGCAGTTTCTCTGCCCCGTCAACAACGCCCTGCAAGTGCAACATCATCCACAGAAAGTGGTGCAATTATATGGGTCCCCGAAATCGGATGGTGGAAATAATACTAATCTCGATGACTCCACTGCAGCAGCAACCTCGTACCAGAACCATATTCATGATCAGCATGCGTCCAATCAGGAGCAGCATGGTCTTAGTCACAGTCAGAGTGATTGCATGTACGATGATATTAGTTCCTTGCTAGGATCAGACTTGATTTCTTCCCAGACTATAATAACGCCGCAGCGGGCGGCCACTCTGGATCTGCCGGTAGCGGCGGGAGCAGTTAGCGTGGGATCGCCGTCTATGTGGTCGATGACAAATGATGAAGAAGAGTACCCGCCTTGTCTTTGGGACTATAATATTGATCCTTTCTTCTTTGATTTTTGA 852 0.5575 MGDPSSPPSHSPEAAATTPTHPSSRKTKGKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSLPSSSSSASSSSSRPSSSSSTQTLRPLLPRPPAASAFLPYGLYNTQFLCPVNNALQVQHHPQKVVQLYGSPKSDGGNNTNLDDSTAAATSYQNHIHDQHASNQEQHGLSHSQSDCMYDDISSLLGSDLISSQTIITPQRAATLDLPVAAGAVSVGSPSMWSMTNDEEEYPPCLWDYNIDPFFFDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3691g00011 283 MobiDBLite consensus disorder prediction 1 42 - -
Pral3691g00011 283 MobiDBLite consensus disorder prediction 96 124 - -
Pral3691g00011 283 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Pral3691g00011 283 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Pral3691g00011 283 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 MobiDBLite consensus disorder prediction 96 126 - -
Pral3691g00011 283 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Pral3691g00011 283 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 MobiDBLite consensus disorder prediction 27 41 - -
Pral3691g00011 283 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 MobiDBLite consensus disorder prediction 1 25 - -
Pral3691g00011 283 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Pral3691g00011 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3691g00011 Pral-Chr3691 82640 83491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3691g00011 23 283 AP2-EREBP Transcription Factor Family AT2G40220 47.525 2.97e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3691g00011 AP2 9.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3691g00011 K09286 - jre:108991752 204.912