Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3691g00010 ATGACAAGCCAGCAATATGCTCAGGTGTTCAATTGGCACTATACAGAGCTGGATAACCATAACCTCGAAGTCCGAAGCAGAAAAGTATTGTTCATCATCTTTCTTTTCTGTTTGATCCTTCTAATTATTCTTCTCTTCCTCTGCGCTCGATGGATCTGCCGGTACCGGGACCACCTTCCGACTACTTTCCACTCTAGTCAGGTGCGGCACGCGGCATCTCCGCCGTCGCAAGGTCTCGACCTTGATTCGATCAAGAAATTGCCGATAATCTTGCACCAGGCGCCGTCGGACTCCCATTGCGCATTGGAGGAAACAGAGTGTTGTATTTGCCTTAGCGTGTTCGAAGATGGCGAGAAATTGAAGGTCTTGCCCGGATGCAATCATTGTTTCCACTGTCAGTGTGTCGATAACTGGCTTATTAATCACTCCAGTTGCCCACTCTGCAGAGCTTCTATCAAAGTTGAAGTTGATTCTTCGTTTCCAGAGATTTTGATTCAGGAACCACCAATTAGAATCGACCTTCAATTCTAG 531 0.467 MTSQQYAQVFNWHYTELDNHNLEVRSRKVLFIIFLFCLILLIILLFLCARWICRYRDHLPTTFHSSQVRHAASPPSQGLDLDSIKKLPIILHQAPSDSHCALEETECCICLSVFEDGEKLKVLPGCNHCFHCQCVDNWLINHSSCPLCRASIKVEVDSSFPEILIQEPPIRIDLQF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3691g00010 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 155 IPR013083 -
Pral3691g00010 176 SMART ring_2 107 148 IPR001841 -
Pral3691g00010 176 SUPERFAMILY RING/U-box 99 155 - -
Pral3691g00010 176 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 159 - -
Pral3691g00010 176 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Pral3691g00010 176 Pfam Ring finger domain 106 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3691g00010 Pral-Chr3691 68674 69565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3691g00010 3 158 C3H Transcription Factor Family AT3G11110 39.103 5.70e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3691g00010 - - gmx:100803278 213.386