Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3691g00008 | ATGGAAAATTTCTACTATTCAAGTTCTGGTTCTAGTAGCTGGTGGCCTGTGCAGGGCTCAAACAGTGCTGGTCCTTCTCCTTTTTCAGCGCAGACTCCATTGTTGCCTCATCACATCTCTGATTCATGCTCTGTTCAGTTCTGTGATCTCCCTCATTCATGGCCTGCAGAAGATAAAGCTTCCAGTGCCTCCAAGAGCCATAGCCAAGCTGAGAAACGCCGTAGGGACAGGATCAATGCACAGCTTGCCACTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTTATAGAGCATGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGCACATCCTTCACAGTCCCTACAGAGATCGACGAAGTTTCAATAGACCAAGACGAAAGCTCAAGTTCCATCATCAACAACAACAATACCAATGTGAATTACAAAGTGGAAGGAAACAACAACATAATGATCAGAGCTTCAGTTTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATCAAAGTTCTCAAAGGCCTGAGGCTCACAGCAGTGAAAGCTGAAATAGCAAGCGTGGGAGGCAGAATCAAAAGCGTATTGGTACTGTGTTCTAAGGACAGTGACGATAATGTTTGTGTGGCCACTCTGAAGCAGTCTCTTAAATCTGCCGTCACTAAGATTGCTGCTTCATCCTCATCAATGGCTTCTGCTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCGCCATGCCTCCACTGA | 783 | 0.461 | MENFYYSSSGSSSWWPVQGSNSAGPSPFSAQTPLLPHHISDSCSVQFCDLPHSWPAEDKASSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIEHVKDLKRKAMDIGTSFTVPTEIDEVSIDQDESSSSIINNNNTNVNYKVEGNNNIMIRASVCCEDRPELFSELIKVLKGLRLTAVKAEIASVGGRIKSVLVLCSKDSDDNVCVATLKQSLKSAVTKIAASSSSMASACPARSKRQRFFLPSPCLH | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3691g00008 | 260 | MobiDBLite | consensus disorder prediction | 7 | 28 | - | - | |
Pral3691g00008 | 260 | Gene3D | - | 56 | 118 | IPR036638 | GO:0046983 | |
Pral3691g00008 | 260 | SMART | finulus | 68 | 117 | IPR011598 | GO:0046983 | |
Pral3691g00008 | 260 | CDD | ACT_UUR-ACR-like | 165 | 200 | - | - | |
Pral3691g00008 | 260 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 61 | 114 | IPR036638 | GO:0046983 | |
Pral3691g00008 | 260 | MobiDBLite | consensus disorder prediction | 55 | 77 | - | - | |
Pral3691g00008 | 260 | Pfam | Helix-loop-helix DNA-binding domain | 65 | 111 | IPR011598 | GO:0046983 | |
Pral3691g00008 | 260 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 62 | 111 | IPR011598 | GO:0046983 | |
Pral3691g00008 | 260 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 54 | 253 | IPR045847 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3691g00008 | Pral-Chr3691 | 58618 | 60295 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3691g00008 | 53 | 260 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G40200 | 47.248 | 7.29e-53 | 170 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pral3691g00008 | HLH | 9.4e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3691g00008 | - | - | gmx:100799687 | 292.352 |