Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3691g00008 ATGGAAAATTTCTACTATTCAAGTTCTGGTTCTAGTAGCTGGTGGCCTGTGCAGGGCTCAAACAGTGCTGGTCCTTCTCCTTTTTCAGCGCAGACTCCATTGTTGCCTCATCACATCTCTGATTCATGCTCTGTTCAGTTCTGTGATCTCCCTCATTCATGGCCTGCAGAAGATAAAGCTTCCAGTGCCTCCAAGAGCCATAGCCAAGCTGAGAAACGCCGTAGGGACAGGATCAATGCACAGCTTGCCACTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTTATAGAGCATGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGCACATCCTTCACAGTCCCTACAGAGATCGACGAAGTTTCAATAGACCAAGACGAAAGCTCAAGTTCCATCATCAACAACAACAATACCAATGTGAATTACAAAGTGGAAGGAAACAACAACATAATGATCAGAGCTTCAGTTTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATCAAAGTTCTCAAAGGCCTGAGGCTCACAGCAGTGAAAGCTGAAATAGCAAGCGTGGGAGGCAGAATCAAAAGCGTATTGGTACTGTGTTCTAAGGACAGTGACGATAATGTTTGTGTGGCCACTCTGAAGCAGTCTCTTAAATCTGCCGTCACTAAGATTGCTGCTTCATCCTCATCAATGGCTTCTGCTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCGCCATGCCTCCACTGA 783 0.461 MENFYYSSSGSSSWWPVQGSNSAGPSPFSAQTPLLPHHISDSCSVQFCDLPHSWPAEDKASSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIEHVKDLKRKAMDIGTSFTVPTEIDEVSIDQDESSSSIINNNNTNVNYKVEGNNNIMIRASVCCEDRPELFSELIKVLKGLRLTAVKAEIASVGGRIKSVLVLCSKDSDDNVCVATLKQSLKSAVTKIAASSSSMASACPARSKRQRFFLPSPCLH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3691g00008 260 MobiDBLite consensus disorder prediction 7 28 - -
Pral3691g00008 260 Gene3D - 56 118 IPR036638 GO:0046983
Pral3691g00008 260 SMART finulus 68 117 IPR011598 GO:0046983
Pral3691g00008 260 CDD ACT_UUR-ACR-like 165 200 - -
Pral3691g00008 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 114 IPR036638 GO:0046983
Pral3691g00008 260 MobiDBLite consensus disorder prediction 55 77 - -
Pral3691g00008 260 Pfam Helix-loop-helix DNA-binding domain 65 111 IPR011598 GO:0046983
Pral3691g00008 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 111 IPR011598 GO:0046983
Pral3691g00008 260 PANTHER TRANSCRIPTION FACTOR BHLH30 54 253 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3691g00008 Pral-Chr3691 58618 60295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3691g00008 53 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 47.248 7.29e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3691g00008 HLH 9.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3691g00008 - - gmx:100799687 292.352