Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3689g00033 ATGACGAATTCCCTCTTCCCCCTCACCGTCTTCTCCGTCAACGTTTGCCTCCTCGCCGCCGTCACCCTCTTCTCTGCAATCCCCTTAATCTATGCTCTGGGTTCCGGCGCCACTCTCGCCGTAGTCGATGACTCCGGCACCGTCTGTGGCATCGTGTCAGGGGAACCGGCGCAGCGCATTGAATGCTATCGTCGCGGGCAGATCCTGCCAGTTGCTCCTAACATTTCGTTTTCGTCGATTTGCGGCGGGAGGAGCTACTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTGCTCTGCTGGGACGCTGTATCTTCCAATTCCAGCGGTTCCTTCCAACCGAAGAGGCTTTACTTTAATTATACTGCTCCGTTGGAGAATCTGGCGGTTGGGGATACCCAAGTGTGCGCGACCGTCGTGGGTTCAGGCAACGTTCTGTGCTGGAGACCCAATGACGTACGTGTGCCGGGTCACTTTGCGACGATAACATCTGGGTCTGGCTTTTCTTGCGGGATCTTGAAGAACACTTCCCGGGTTAGTTGTTGGGGAATGCAGCCCCTTTCGCGTCAAATAGTGAACGGATTCGGAGTCATGCCCATGTTGAGTCTTGTCGCCGGCGATTCACATGTTTGTGGATTGAATTCAACAGGATTTGTGGTATGCAGAGGAAATAACAGTTCTGGGCAACTTAGTGTTCCCCAAGGACGACCTCTGGAATATTCTGGGTTGGCTCTCGGAGCTGAACATAGCTGCGCGATCAAACAATTGAATCGTTCGGTTGTTTGCTGGGGAGGCGGAGGGCAGTTCTCGGCGAATGTTACAGAAGGAACATCTTTCGAGTTAATTGTTTCTGGGTCAAATTTTACTTGCGGATTAGTCTCCGGCAACTTTTCTGTAATGTGCTGGGGACCTGGTTGGGCTAATAGTTCTGGCTCCAATCCGCTAGAGCTTCCTTTACCACCTATTCTCCCAGGACCTTGTGTTCAATCTTCTTGTGAGTGTGGTCAATATCCTCAATATCAAAATCTGTGCTCTGGTTCTGGTGTTATATGCAGGCCTTGTTCTCCAAACATTTCAGCCCCAACGCTGCCGCCATTCCCTTCTCCGCCACCCTTGGTTTCTTCTCCGCCGTCGCGATCAAAGGCACTGACCAGGGGTTTATTGGCATTCGCCATTGTTGGATCTATCGGAGCTTTTGTCGGTATATGCACCGTAATTTATTGCCTGTGGACTGGAGTTTGTTTTGGTAAGAAGAAAGTTCACAATTCTGTCCAACCCAGAATCACCAGAGAAGGTAGTTCCAATAATGGAGGTGCAGTGAATTCTAGCAATAGCCCGCCTTCGAGGTCATCCACCATTAGACGTCAGGGGTCAAGGATAATGAGACGGCAAAGGAGCGGAACATCATCCACAAAACATCCGGATAGGGCAGAGGAATTCACTCTAGCTGAGCTTGTGGCAGCCACGAATAATTTTTCCCTTGAAAACAAGATTGGTGCTGGTAGCTTTGGTGTTGTGTATCGAGGGAAACTCGCAGATGGTCGCGAGGTGGCGATCAAGAGGGGTGAGATTGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAACTCGCATTCTTGTCCCGTTTACACCACAAACACTTGGTCAGGCTAGTTGGATTTTGTGAGGAAAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAACGGAGCATTGCACGATCATTTGCATGACAAGAACAACGTGGAAAAGATTAGTAGTTTCTTGAATTCGTGGAAAATGAGGATCAAAATCGCTCTAGATGCTTCTCGAGGGATTGAATATCTCCACAACTATGCAGTCCCACCCATCATTCACAGAGACATAAAGTCTTCCAACATTCTTCTCGACGCGAATTGGACAGCGAGAGTGTCTGATTTTGGATTGTCATTGATGGGTCCAGACTCTGATCATGATTACCGGCCAACAAAGGCCGCAGGTACCGTAGGATACATTGATCCTGAGTACTATGGTCTGAATGTCTTGACAGCCAAGAGTGATGTCTATGGATTTGGAATAGTACTGCTAGAACTCTTAACTGGAAAGAGGGCTATATTCAAGCATGGTGAAAATGGCGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCTGCAATAATAGCTGACGAGTTGCCCAAGATTCTGGACCCGAGGGTTGGGCCGCCGGAGATGAACGTGGCAGAGGCGGTGGAGCTGGTGGCGTATACTGCAATGCACTGCGTGAATTTGGAAGGGAAGGACAGGCCAACAATGACTGACATTGTGGCCAATCTGGAGAGGGCTTTGTCTCTTTGTGATAGTAGTCATGGCAGCATCTCCAGTGGCACAATCTCTATTGTTTCAGAATGA 2403 0.4915 MTNSLFPLTVFSVNVCLLAAVTLFSAIPLIYALGSGATLAVVDDSGTVCGIVSGEPAQRIECYRRGQILPVAPNISFSSICGGRSYFCGLRSGNYSLLCWDAVSSNSSGSFQPKRLYFNYTAPLENLAVGDTQVCATVVGSGNVLCWRPNDVRVPGHFATITSGSGFSCGILKNTSRVSCWGMQPLSRQIVNGFGVMPMLSLVAGDSHVCGLNSTGFVVCRGNNSSGQLSVPQGRPLEYSGLALGAEHSCAIKQLNRSVVCWGGGGQFSANVTEGTSFELIVSGSNFTCGLVSGNFSVMCWGPGWANSSGSNPLELPLPPILPGPCVQSSCECGQYPQYQNLCSGSGVICRPCSPNISAPTLPPFPSPPPLVSSPPSRSKALTRGLLAFAIVGSIGAFVGICTVIYCLWTGVCFGKKKVHNSVQPRITREGSSNNGGAVNSSNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGAGSFGVVYRGKLADGREVAIKRGEIGSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHDKNNVEKISSFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGFGIVLLELLTGKRAIFKHGENGGTPVSLVDFAVPAIIADELPKILDPRVGPPEMNVAEAVELVAYTAMHCVNLEGKDRPTMTDIVANLERALSLCDSSHGSISSGTISIVSE 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3689g00033 800 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Pral3689g00033 800 ProSiteProfiles Protein kinase domain profile. 491 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00033 800 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 200 786 IPR044815 GO:0004674
Pral3689g00033 800 MobiDBLite consensus disorder prediction 425 454 - -
Pral3689g00033 800 MobiDBLite consensus disorder prediction 425 474 - -
Pral3689g00033 800 CDD STKc_IRAK 497 778 - -
Pral3689g00033 800 Gene3D Transferase(Phosphotransferase) domain 1 572 789 - -
Pral3689g00033 800 FunFam Serine/threonine-protein kinase-like protein CCR4 572 793 - -
Pral3689g00033 800 SUPERFAMILY RCC1/BLIP-II 32 265 IPR009091 -
Pral3689g00033 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pral3689g00033 800 SUPERFAMILY Protein kinase-like (PK-like) 468 776 IPR011009 -
Pral3689g00033 800 Gene3D Phosphorylase Kinase; domain 1 452 571 - -
Pral3689g00033 800 FunFam serine/threonine-protein kinase-like protein CCR1 460 571 - -
Pral3689g00033 800 SMART serkin_6 491 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00033 800 Pfam Protein kinase domain 492 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00033 800 Gene3D - 24 193 IPR009091 -
Pral3689g00033 800 Gene3D - 194 342 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3689g00033 Pral-Chr3689 255298 257953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3689g00033 11 800 Receptor kinase-like Gene Family AT3G55950 62.652 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pral3689g00033 Pkinase 8.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3689g00033 - - gmx:100798905 1108.59