Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3689g00030 ATGGCGATTAAAGCCAACAGAACGGTGGTTTCGGCTTGTCTTTTCTGGGTTTTCATGCTGTGCGCGACAATAGCATTCTTTCAGCTTAAACTGATAGAGAACGGAGGAGACCGTTCGTCTCACCACAAGGCCATTGAAACTGCGCACCGTTCGGAAAACCCAGCTGAAGAGGATTTGGAGGGAGTCACCCACAAAGTGTTTTTTGATATAGAGATCGATGGGAAACTTGCGGGTCGCATACTCATGGGACTTTTTGGAGCAGTGGTTCCAAAAACTGTAGAAAACTTTCGAGCACTTTGTACTGGGGAGAAAGGCGTAGGAAAAAGCGGGAAGCCTCTTCATTACAAAGGTAGTACATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCGCGGTGATGGACGAGGTGGAGAATCAATCTATGGTTTCAGGTTTGCTGATGAAAACTTCAAAGTGAAACATAATGGACCAGGATACTTGTCGATGGCGAATGCTGGAACGGATACAAATGGCTCACAATTTTTTATAACAACGGTTAAAACTAGCTGGTTGGACGGCCGCCATGTTGTATTTGGGAAGGTGCTCTCGGGGATGGACGTTGTCTACAAGATCGAAGCACAAGGAAGCGCTAATGGCGAGCCCAAAGGCAAGGTTCTTATACTTGCCAGTGGGGAATTTACTTCATGA 702 0.4644 MAIKANRTVVSACLFWVFMLCATIAFFQLKLIENGGDRSSHHKAIETAHRSENPAEEDLEGVTHKVFFDIEIDGKLAGRILMGLFGAVVPKTVENFRALCTGEKGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGFRFADENFKVKHNGPGYLSMANAGTDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVVYKIEAQGSANGEPKGKVLILASGEFTS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3689g00030 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 68 226 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 190 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 CDD cyclophilin_ABH_like 64 229 - -
Pral3689g00030 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 230 IPR002130 GO:0000413|GO:0003755
Pral3689g00030 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 230 - -
Pral3689g00030 233 FunFam Peptidyl-prolyl cis-trans isomerase 60 232 - -
Pral3689g00030 233 SUPERFAMILY Cyclophilin-like 62 231 IPR029000 -
Pral3689g00030 233 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Pral3689g00030 233 Gene3D - 53 233 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3689g00030 Pral-Chr3689 223191 226432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3689g00030 78 210 U-box Gene Family AT5G67530 44.030 4.56e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3689g00030 K01802 - gmx:100792649 355.525