Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3689g00029 ATGGCGATTAAAGCCAACAGAACGGTGGTTTCGGCTTGTCTTTTCTGGGTTTTCATGCTGTGCGCGACAATAGCATTCTTTCAGCTTAAACTGATAGAGAACGGAGGAGACCGTTCGTCTCACCACAAGGCCATTGAAACTGCGCACCGTTCGGAAAACCCAGCTGAAGAGGATTTGGAGGGAGTCACCCACAAAGTGTTTTTTGATATAGAGATCGATGGGAAACTTGCGGGTCGCATACTCATGGGACTTTTTGGAGCAGTGGTTCCAAAAACTGTAGAAAACTTTCGAGCACTTTGTACTGGGGAGAAAGGCGTAGGAAAAAGCGGGAAGCCTCTTCATTACAAAGGTAGTACATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCGCGGTGATGGACGAGGTGGAGAATCAATCTATGGTTTCAGGTTTGCTGATGAAAACTTCAAAGTGAAACATAATGGACCAGGTTGGACGGCCGCCATGTTGTATTTGGGAAGGTGCTCTCGGGGATGGACGTTGTCTACAAGATCGAAGCACAAGGAAGCGCTAATGGCGAGCCCAAAGGCAAGGTTCTTATACTTGCCAGTGGGGAATTTACTTCATGATTTGACTTGTTACGTATTTCATTGA 651 0.4654 MAIKANRTVVSACLFWVFMLCATIAFFQLKLIENGGDRSSHHKAIETAHRSENPAEEDLEGVTHKVFFDIEIDGKLAGRILMGLFGAVVPKTVENFRALCTGEKGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGFRFADENFKVKHNGPGWTAAMLYLGRCSRGWTLSTRSKHKEALMASPKARFLYLPVGNLLHDLTCYVFH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3689g00029 216 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 216 IPR002130 GO:0000413|GO:0003755
Pral3689g00029 216 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 165 - -
Pral3689g00029 216 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Pral3689g00029 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Pral3689g00029 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Pral3689g00029 216 Gene3D - 53 176 IPR029000 -
Pral3689g00029 216 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 68 166 IPR002130 GO:0000413|GO:0003755
Pral3689g00029 216 SUPERFAMILY Cyclophilin-like 62 166 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3689g00029 Pral-Chr3689 223191 226439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3689g00029 78 163 U-box Gene Family AT5G67530 44.828 8.48e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3689g00029 K01802 - qsa:O6P43_013862 238.81