Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3689g00012 ATGGGTCCAGAAACTGATAGGCTAGCTCTACTTGCTTTGAAGGACAAGCTCACAAATGGCAATCCTCAAGTTCTACCTTCATGGAACAGTTCTCTCCACTTCTGTAAATGGGAGGGTGTTTCCTGCAGTGCTCCTCACATCAGGGTCTCTAAACTGCAGTTAGCAGGTCCGAGTTTCGATGGGAGTCTTGCACCAGCAATAGGTAATCTTACCTTCCTTAAACTAATAAATATTACTTTTACCAGAGTGCATGGTGAGATCCCCAAAGAAATTGGCCGTCTCAAACGGTTGCAGGTTCTCTTCCTAAGGCTTAATAACATTCAGGGAGAGATTCCCATAGAGCTTGCTAACTGTTCAAATCTGCAACTAGTAGTCTTCAACCGCAATAACTTGACTGGCAAAATTCCCCCCTGGTTAGGATCAATGCGATCACTAAATGCTTTGCACCTTGATGTCAATAAGTTCTCTGGTAGTATTCCAGAGTCCTTGGGAAATCTTTCGTCTTTGAGGGTCTTGTCTCTTCCGGGAAATAATCTCCAAGGTAGCATACCTCAAACTCTAGGCCGGTTGACAAGTTTGAGCGATCTTCTTCTAGCTCAAAATAATTTGTCTGGAATAATCCCTTTATCACTCTATAATCTTTCCAATGTCGTGATTTTTGATTTGGGATCTAACCACTTGTTCGGAACTATTCCATCGAATATAGACCTTTCTTTCCCCAATGTTCAAACTTTTTGGGTTGGAAGCAACTCTTTAACTGGAACAATTCCCCCCACATTTTCCAACCTCTCTCGATTGCAAAGCGTAGATCTAGTTGCAAATCGTTTCAGTGGGCCATTCCCCACCTCTTTGGGAAGACTCCAAAATCTTCTTGAAATGAACATTGACTTCAATATTTTGGGGAGTGGAAGCAATGGTGACTTGGATTTCCTTTCGTCGTTAACCAACTGTAGCCAATTGCTTACATTGAGCCTACAAGGAAATGGATTTGGTGGTGTATTGCCAGAGTCAATTGGAAACTTCACTTCACCACTGAATACACTTCTTGTGGGACACAATAAGATCTCTGGAAGCATACCTGAAGAGATTGGGAAACTAGTTGGCTTAACATTTCTTGATATGGGAGGGAACCTTCTTCAAGGCGAAATTCCAGTTTCAATTGGAAAACTGAAAAATCTTGGAAGGACATACTTCGAAAAAAACCAATTATCTGGAAATATTCCTGCGGTTCTGGGCAATCTTACCAAGTTGTTCGATTTGTATTTAAACAACAACAACTTTGAGGGAAGTATTCCAGATGCCGTCAGAGATTGCAAAAATATGCAGAATTTGTTTCTTTCCAAAAACAAATTGAGCGGTAATATACCCAATGATACATTTGGTCGGCTAGAAGATTTAGTAGTTCTTAACATGTCTTACAATTCCTTGACCGGTCCCCTTCCATCAGAGTTTGGTAACCTGAAGCATTTAGTGGAACTAGATGTTATTGAAAACAAATTGTCTGGCGATATTCCAATTGCACTAGGTGAATGTTCAGGGCTGTCACTGCTGTTCATGAATGGAAACTTTTTCCAAGGAAGTATTCCCTCATCATTTGGTTTGCTAAAATCTCTTGAATTCTTGGATCTTTCCAGAAATAACTTGTCAGGCAGAATTCCCAATGAATTGAAAGATCTTCCATTTTTGGAGGCCTTAAACCTCTCATTCAACCATCTCCAAGGTGAGGTTCCAAAAGGAGGAGTGTTTGATCACACCACTGCTATCCAACTCACAGGAAATGAGGATCTTTGTGGTGGGATACCTGAATTGAAGCTGCCAGCATGTTCAAATAAGCCAGAGAAGTCTTTTAAAACCGTCGTTATCCTCATCGTTGTGATAGGCAGTGCTTTCATTTGTTTTGTAGTTTCCATCAGTATTTATTGGAGAAGAAAGCCAAATGGGTTATCTTCTTCCTCATCTTCTATGGAGAATTGGCTCTTCAAAGTTTCTTACAGAGAGCTACATGATGCTACCAATGGGTTTTCTTCATCTAACTTGGTCGGCTCAGGAAGCTTTGGCTCTGTATATAGGGGAACACTTCATTACTATGAGAAACCTATTGTTGTAAAGGTGCTAAATCTTCAGACACGTGGGGCATCGAAAAGTTTCGCCAATGAATGCAAAGCTCTTAGTAAAGTCCGTCACCGAAACCTTCTGAAGGTTTTAACTTGTTGTTCCAGTATCGATTACAAAGGTGGCAATTTTATGGCCCTAATTTTTGAGTTCATGCCAAATGGGAGTTTGGAGAGCTGGCTGTCAACAAATGAAAATGGTGAATCAAGAAATCTACATCTAAATTTTGTACAAAGATTAGATATAGCCATCGATGTAGCTAATGCTTTGGATTACCTTCACCATGATTGTGAGGTAGCTATTGTTCATTGTGACATCAAGCTGAGTAATGTTCTTCTTGATGAAGACATGGTTGCTCACTTAGGAGACTTTGGGTTAGCTAAACTCCTTCATGAAGTTACAGGCTATTCTAGCAGTGATCAAACTCCTTCCTCAGCAATTAAAGGAACCATTGGTTATATTCCTCCAGAGTATGGGGGAGGTGGAGCAGTGACACCACAAGGGGATATCTATAGCTATGGAGTTCTATTGTTAGGGTTGCTCACTGGAAAAAAGCCTACAGATAGCATGTTTGGAGTAGATTTGAGCCTGCACAAGTTTTGTAAGTTGGCATTGTCAGACAGAATCACTGAGATAGTGGACTCAAGTTTGCTCATACCATCTCAAAGAGGCCACATTAAAGTGACAGAGAAGCCTAATGTGAAATTTGAAATTCAAGAGTCTTTGATCAGCTTTGCTAAGATTGGAGTGGCATGTTCAGTAGATTCGCCCAGTGAACGGATGGGGATAAAAGATGTTCTGGTGGAGTTGCTCGCCATTAAAAAGAGGCTGTCCCCAGTTGGTATCAACAGTTCTATGCAAAATAATCTGCATTCATATGGAAATTCTTCTGGCTTTTGA 3012 0.4074 MGPETDRLALLALKDKLTNGNPQVLPSWNSSLHFCKWEGVSCSAPHIRVSKLQLAGPSFDGSLAPAIGNLTFLKLINITFTRVHGEIPKEIGRLKRLQVLFLRLNNIQGEIPIELANCSNLQLVVFNRNNLTGKIPPWLGSMRSLNALHLDVNKFSGSIPESLGNLSSLRVLSLPGNNLQGSIPQTLGRLTSLSDLLLAQNNLSGIIPLSLYNLSNVVIFDLGSNHLFGTIPSNIDLSFPNVQTFWVGSNSLTGTIPPTFSNLSRLQSVDLVANRFSGPFPTSLGRLQNLLEMNIDFNILGSGSNGDLDFLSSLTNCSQLLTLSLQGNGFGGVLPESIGNFTSPLNTLLVGHNKISGSIPEEIGKLVGLTFLDMGGNLLQGEIPVSIGKLKNLGRTYFEKNQLSGNIPAVLGNLTKLFDLYLNNNNFEGSIPDAVRDCKNMQNLFLSKNKLSGNIPNDTFGRLEDLVVLNMSYNSLTGPLPSEFGNLKHLVELDVIENKLSGDIPIALGECSGLSLLFMNGNFFQGSIPSSFGLLKSLEFLDLSRNNLSGRIPNELKDLPFLEALNLSFNHLQGEVPKGGVFDHTTAIQLTGNEDLCGGIPELKLPACSNKPEKSFKTVVILIVVIGSAFICFVVSISIYWRRKPNGLSSSSSSMENWLFKVSYRELHDATNGFSSSNLVGSGSFGSVYRGTLHYYEKPIVVKVLNLQTRGASKSFANECKALSKVRHRNLLKVLTCCSSIDYKGGNFMALIFEFMPNGSLESWLSTNENGESRNLHLNFVQRLDIAIDVANALDYLHHDCEVAIVHCDIKLSNVLLDEDMVAHLGDFGLAKLLHEVTGYSSSDQTPSSAIKGTIGYIPPEYGGGGAVTPQGDIYSYGVLLLGLLTGKKPTDSMFGVDLSLHKFCKLALSDRITEIVDSSLLIPSQRGHIKVTEKPNVKFEIQESLISFAKIGVACSVDSPSERMGIKDVLVELLAIKKRLSPVGINSSMQNNLHSYGNSSGF 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3689g00012 1003 Gene3D Ribonuclease Inhibitor 2 205 IPR032675 -
Pral3689g00012 1003 SMART LRR_typ_2 366 390 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 166 189 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 559 584 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 94 118 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 414 438 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 190 213 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 535 558 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 487 511 IPR003591 -
Pral3689g00012 1003 SMART LRR_typ_2 463 486 IPR003591 -
Pral3689g00012 1003 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Pral3689g00012 1003 SUPERFAMILY L domain-like 346 598 - -
Pral3689g00012 1003 Gene3D Phosphorylase Kinase; domain 1 637 755 - -
Pral3689g00012 1003 Pfam Leucine rich repeat 440 500 IPR001611 GO:0005515
Pral3689g00012 1003 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Pral3689g00012 1003 SMART serkin_6 674 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00012 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pral3689g00012 1003 Pfam Protein kinase domain 676 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00012 1003 PANTHER OS04G0122200 PROTEIN 188 978 - -
Pral3689g00012 1003 Gene3D Transferase(Phosphotransferase) domain 1 756 993 - -
Pral3689g00012 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 646 755 - -
Pral3689g00012 1003 ProSiteProfiles Protein kinase domain profile. 674 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3689g00012 1003 SUPERFAMILY Protein kinase-like (PK-like) 652 974 IPR011009 -
Pral3689g00012 1003 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 756 985 - -
Pral3689g00012 1003 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 44 306 - -
Pral3689g00012 1003 Pfam Leucine rich repeat N-terminal domain 4 43 IPR013210 -
Pral3689g00012 1003 Gene3D Ribonuclease Inhibitor 306 617 IPR032675 -
Pral3689g00012 1003 Gene3D Ribonuclease Inhibitor 206 305 IPR032675 -
Pral3689g00012 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 307 614 - -
Pral3689g00012 1003 SUPERFAMILY L domain-like 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3689g00012 Pral-Chr3689 103278 106612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3689g00012 4 981 Receptor kinase-like Gene Family AT3G47570 44.266 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3689g00012 Pkinase 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3689g00012 - - ahf:112766919 1064.68