Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3689g00001 ATGGAAGATGGCATGTCAGGGTTTTGTATCAGACCAGGAAGTTTTCGGAGAGGTGATAGTAACGGGAATAGTGGAAGTAGTGGAACTAAGTGTGGGCGTTGGAATCCGACAACAGAACAGGTTAAGCTTCTTACTGATTTGTTCATGTCTGGACTGAGAACCCCAAGCACTGATCAGATTCAGAAGATCTCCACTGAGCTTAGCTATTATGGCAAGATCGAGAGCAAGAATGTGTTTTATTGGTTTCAGAATCATAAAGCCAGGGAAAGACAGAAGCGTCGCAAGGTCTCATTCCACGACAAGGATCTCAGTAACATTGGCCGTCAAAACTCTCTGTCATCTCCCGCACACAATTTTGCAGAGGCGGATCAAGGTCAAGAGCCAGAGAGAGTGATAGAGACTCTTCAACTGTTTCCCTTGAACTCCCTTGGTGAATCAGAAGCAGAGAAACTGAGGGCACAAGCGAATAGATATGGGGATGATAGTAGCATGTTTCAGTCCTCAATGGCAGAAAATATGGATAGCCCAGCATTAGATTTGCGCTTAAGCTTTCTGTAA 558 0.448 MEDGMSGFCIRPGSFRRGDSNGNSGSSGTKCGRWNPTTEQVKLLTDLFMSGLRTPSTDQIQKISTELSYYGKIESKNVFYWFQNHKARERQKRRKVSFHDKDLSNIGRQNSLSSPAHNFAEADQGQEPERVIETLQLFPLNSLGESEAEKLRAQANRYGDDSSMFQSSMAENMDSPALDLRLSFL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3689g00001 185 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 111 IPR044555 GO:0003700|GO:0099402
Pral3689g00001 185 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Pral3689g00001 185 CDD homeodomain 33 93 IPR001356 GO:0003677
Pral3689g00001 185 MobiDBLite consensus disorder prediction 104 126 - -
Pral3689g00001 185 MobiDBLite consensus disorder prediction 12 35 - -
Pral3689g00001 185 SUPERFAMILY Homeodomain-like 27 95 IPR009057 -
Pral3689g00001 185 MobiDBLite consensus disorder prediction 104 120 - -
Pral3689g00001 185 Gene3D - 30 98 - -
Pral3689g00001 185 SMART HOX_1 29 96 IPR001356 GO:0003677
Pral3689g00001 185 FunFam WUSCHEL-related homeobox 11 30 98 - -
Pral3689g00001 185 MobiDBLite consensus disorder prediction 17 35 - -
Pral3689g00001 185 Pfam Homeodomain 31 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3689g00001 Pral-Chr3689 4096 4732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3689g00001 23 185 Wox Gene Family AT3G11260 58.621 1.28e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral3689g00001 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3689g00001 - - pvu:PHAVU_008G226100g 250.366