Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3680g00005 ATGGCTACCACTCCACTAAACATCTACTTTCTCCTTTTGGTATATTTTCTATGCGAAACAGTGGTATTCGCAGAACCCATACCCCTCCGCTCGTCACTTTCCCCCCTTGGTCCTAACTCTTCATGGTCTTCAAATTCTGGTCGATTTAAATTTGGATTTTACAATCCAAGCGACGGCTTCAAAGTTGGAATCTGGTTACTTGATGGGACTAATAAAACAATCGTCTGGACTGCAAATCGCGATGACCCTCCTGTCTTCTCAAATGCAAAGCTTGTTCTAACCGAGAGAGGTCAGCTTTCTCTACGAACAGATCAAGGGCAACCGAAGGTTATTGCTCATAGTAACAAAGGAAATGTTTCCTCTGCTTCCATGCTTGATTCTGGAAACTTTGTTCTGCAAAACGAAAGTTTACACATCCTTTGGCAGAGTTTCGATTACCCAACTGATACCATGTTAGGGGGTCAAAAACTACATTCTGGGAGTCAATTGGTGTCTAGTTCATCAGACACCAACCAATCTTCTGGAAGGTTTCAACTCTCTATGCAGGCTGATGGAAACCTTGTTCTGTACCCACGATATTCTGGTCGTACAGCTTATGATGCTTACTGGGCCTCTGACACCACTTATCATGGCACAAGTTTCAAATATTATCTTTTCCTCAACAACACAGATCCTCAGCCTCTGTGCATTGTAAATGCTAGTAGTTCCAACTCAGAAATACTTTGGTGGAGGGGTGATAGCAGCTTCAAAGGAAACAAAACTATTTATCGCGCAACTATTCATTCTGATGGAGTTTTACGACTCTATGCTCATTTTGACAACGCAGATGGGAAACACCAAGTTATGAAGTTATGGTCACCACCAGATTTGGACAACCTTTGTAATGTGAATTCTTTTTGCGGGTTCAACAGCTATTGTACCGTCAATGACAACCAACCTTATTGTAATTGTCTTCCCGGAACTGATTTTACAGACCCAAGTGATCATAATCTGGGATGCAAAAGGAACTTCTCAGAAGCAGAATGTAAGGGTGGGAAAGACAATGCAACTTCTTATTTCATGTACCCCATGGAACATATGAGAGTAGGTGATCTCGATCTTCCTTATACAGAGGAAGACATTTTAGAGGGGGAATGCCCGTTTTCTTGTTTGCAAGACTGTTTCTGTGGGGCTGCATTTTATGAAAACAATCGCTGCAAGAAACAAGAACTTCCATTAAGATATATTGGCAGAGAAACACAAGTGTCCTCCTCCTCCTATACAATATACTTCAAGGTGGGAAATCAGAGCCTCAGAAGCAACAATGCTTCATTTTCCATATCTGAGCCTGACCAACCACCTCCCATCAAGACTACCAGTAAGAAAGCAATTAAGGTGATCATTCTCATTGTTTTGAGTTTCGTTATTCTTTTGTGTTCTGCTGTTGCAATCTCTAGCCGATTTATATACAAGATTGGAGTTTTAAGTTACAAGAGGTTGCTGGAGACTGGAGATTTAGGCTTGAGCGAAGGTACTACTCTGAGGGTATTTTCATACAATGAGCTCAAGAAAGCAACACATGGCTTCAAACAAGAGGTGGGTAAGGGTTCTTTCGGATCAGTTTACAGAGGAACTTTACATAAAGGAAGAAAACTGATTGCCGTAAAAAGGCTACACAGGTTTATTGAAGAAGGAGAGAGAGAATTCCAAGCTGAAATGCGAGCCATTGGGAAAACACACCACAAAAACTTAGTTCGCTTACTGGGATATTGTGCTGAGGGATCTAAAAGGCTTCTGGTTTATGAGTACATGAGTAATGGCTCCCTTGAGAAGCTCATCTTTGGTGACAGTACTGTACGTCCAGATTGGGATGAGAGAAGAAGAATAGCACTGGACATTGCAAGAGGCTTGTTGTATCTGCATGAACAATGCAAGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTTTTCAGAGCTAAAATATCAGACTTTGGGTTAGCCAAACTTCTAATGCCGGATCAAACAAGAACCTTCACTCAAGTTAGGGGCACGAGAGGCTATTTGGCTCCAGAGTGGAATAAGAACACTCCAATAACAGTGAAAGCAGATGTTTATAGCTATGGAATAATGCTTTTGGAGATTGTATTTTGCAGAAAAAGCTTAGTGGTCAATATGTTGAATCCAGAGCAAATTGTTCTGTCCAATTGGGTGTACAAGTGTTTTGCTCGGAGGGAGCTAAACAAGCTGGTTGCTGGGGAAGAAGTGGATAATAGCTTACTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGACGAGCCTTTTCTTCGGCCATCAATGAAGAGTGTGGTATTGATGCTTGAGGGAGTTACGGAAGTGGCTGTTCCTCCTTGTCCGTCTCCTGATTCTACTTGA 2418 0.4181 MATTPLNIYFLLLVYFLCETVVFAEPIPLRSSLSPLGPNSSWSSNSGRFKFGFYNPSDGFKVGIWLLDGTNKTIVWTANRDDPPVFSNAKLVLTERGQLSLRTDQGQPKVIAHSNKGNVSSASMLDSGNFVLQNESLHILWQSFDYPTDTMLGGQKLHSGSQLVSSSSDTNQSSGRFQLSMQADGNLVLYPRYSGRTAYDAYWASDTTYHGTSFKYYLFLNNTDPQPLCIVNASSSNSEILWWRGDSSFKGNKTIYRATIHSDGVLRLYAHFDNADGKHQVMKLWSPPDLDNLCNVNSFCGFNSYCTVNDNQPYCNCLPGTDFTDPSDHNLGCKRNFSEAECKGGKDNATSYFMYPMEHMRVGDLDLPYTEEDILEGECPFSCLQDCFCGAAFYENNRCKKQELPLRYIGRETQVSSSSYTIYFKVGNQSLRSNNASFSISEPDQPPPIKTTSKKAIKVIILIVLSFVILLCSAVAISSRFIYKIGVLSYKRLLETGDLGLSEGTTLRVFSYNELKKATHGFKQEVGKGSFGSVYRGTLHKGRKLIAVKRLHRFIEEGEREFQAEMRAIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLEKLIFGDSTVRPDWDERRRIALDIARGLLYLHEQCKAPIIHCDIKPQNILMDEFFRAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGIMLLEIVFCRKSLVVNMLNPEQIVLSNWVYKCFARRELNKLVAGEEVDNSLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTEVAVPPCPSPDST 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3680g00005 805 Gene3D - 148 290 - -
Pral3680g00005 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 169 270 IPR036426 -
Pral3680g00005 805 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 796 - -
Pral3680g00005 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Pral3680g00005 805 Gene3D Transferase(Phosphotransferase) domain 1 597 795 - -
Pral3680g00005 805 CDD STKc_IRAK 526 790 - -
Pral3680g00005 805 Gene3D Phosphorylase Kinase; domain 1 494 596 - -
Pral3680g00005 805 SMART serkin_6 520 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00005 805 FunFam Serine/threonine-protein kinase 147 281 - -
Pral3680g00005 805 Gene3D - 31 146 IPR036426 -
Pral3680g00005 805 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Pral3680g00005 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 207 IPR036426 -
Pral3680g00005 805 CDD B_lectin 35 147 IPR001480 -
Pral3680g00005 805 SMART blect_4 33 147 IPR001480 -
Pral3680g00005 805 FunFam S-receptor-like serine/threonine-protein kinase 494 596 - -
Pral3680g00005 805 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Pral3680g00005 805 ProSiteProfiles Bulb-type lectin domain profile. 148 281 IPR001480 -
Pral3680g00005 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 801 - -
Pral3680g00005 805 Pfam Protein kinase domain 523 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00005 805 ProSiteProfiles Protein kinase domain profile. 520 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00005 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Pral3680g00005 805 SUPERFAMILY Protein kinase-like (PK-like) 505 789 IPR011009 -
Pral3680g00005 805 Pfam D-mannose binding lectin 73 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3680g00005 Pral-Chr3680 83289 85718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3680g00005 391 800 Receptor kinase-like Gene Family AT1G66980 36.712 3.04e-68 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3680g00005 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3680g00005 - - pcin:129309635 1036.17