Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3680g00004 ATGTCCCCCATTCCTCTGTTCTTATTGTCTGTAGTTCTATCTGCAAACCAAGTTAGGGCTCAAAACAATGATTCCAACGTCATAAATTTGGGTTCTTCTCTCTCCCCAAAAACGAATTCTACTTCATGGGTTTCACTGTCGGGTCATTTTTCCTTCGGCTTTTATCCGCAAGATAATGGCTTTGCTGTTGGAATATGGCTAATGGGTGAACCAGAAGGAACCATCGTTTGGACACCAAACTTAAAAAATCTATCTGCTTCCTCTGATTCAGTAATTGAATTAACCAAAGAGGGTCAGCTTCTGCTCAGAAACGAGAAACAGATGGAAGTAGTCATTGCTAACGCGTCTGAGCCTGCGGTTTCAGCATCTATGCTTGATTCTGGGAATTTTGTGCTTTATAGTAAGAATCATAGTGTCGTCTGGCAAAGCTTTGATTCTCCCACGGACACCATATTAGGAGGTCAGAATTTATCTGAGGGACAAAATTTGACTTCTGCAAATGGACATTTTACTCTCAACATGCAGAGTGATGGAAATCTTGTTGCCTACCCTGTGAATAATGAAAGAGAAGACGATGCTTACTGGCACTCAAATACTTCTCAACTACTTGTCTCACAACTTACTCTTAATCTTACAGGCTTTCTTTGCCTCAGCGATGATGATGGGGATACCATCAAAGTTCTGGCCAGTCGCAGCAATCGCGGGAGGAACACAAGCTTAATCTATTGTGCAACATTGGATTTGGATGGCATATTTAGATTGTATGTTCACACTTTTGAGAAGAATACTGGCTTCACCAGCCAGATTTTGTGGGAGGCTATTTCTGATCATTGTCAAGTCAAGGGCTTTTGTGGCTTGAATAGTTATTGTTTCATCGTGGCTGGCAAAGCTGAATGCAAGTGTTATCCCGGATTCAGCCCAATAAGTGGAAACAACAGCATGTTCTTGGTTTGTGATCAGACCATGAAAAATGATTGTATCACCAGTAGAGATCCGAGGATGCTATACAATATTAGTAGCCCATTGCAACATATGCAATGGAGCCTTATTCCTTATTGGAACATGCAATTGGAAATGGAAGCTTGTGGGAAGTCTTGCCAGGAAGACTGTGATTGTGGGGCAGTGTTACATGAAGATGGCAGCTGCAAGAAGTATAAGCTTCCGCTTGCTTTTGGCAGAATTAATAATACTGTATCAACCACAGCCCTCTTCAAGTTGCCTTCAATGAATGCCATTCATCCAAAAAAGCCAGAGGTTGTTGTTGACCACAAGAAAAATCTAATTTTTACTCTGCTCATCGTTCTAGGCTCGATTTTATTCCTTTGCTTAGTCTTTGCAATATCTATTTTCTTCATCTACATGCATAAAGTCTATTCATACACAAAGCTCGCTGCTAGTAGCGAAAATTTGGGGTTTGTTGAGGATTGTAGTTTACGAACATTTACCTTTGATGAGTTGGTGAATGCAACTAGAAACTTCAAAGAAGAGATCGGTAGAGGATCTTTTGGAGTGGTTTACAACGGAACAATTCAAGGAAATCATCAAAGGATAGCTGTGAAGAAATTAGACAATGTTGTTGACGAAGGAGAAAGAGAATTTCAAGCTGAAATCACTGCAATTGCCCAAACTCATCACAGAAATCTTGTTCAGCTTATTGGTTATTGCATTAATGGTTCAAGAAAGCTTCTTGTTTATGAATACATGAGCAATGGGTCCCTAGCGGATTTTCTGTTCAAGGCTCAGATGCATCTATCTTGGAAACAAAGAGTCAAGATTGCATTGGATGTCGCAAGAGGTATCTTATATCTACACGAAGAATGTGAAGTTTGTATCATCCATTGCAATATCAAGCCTCGTGACATTCTCTTGGATGAAATGTGGACAGCAAAGGTATCTGATTTTGGACTTGCAAGGCTATCAATGCCAGAACAGTCAAGAACCAGAAGTAGCAATGAATCAACAAGTGGCTATGTGGCACCTGAACGACAAAAAGATGCATTGGCGTCTGTTAAAGTTGACATCTACAGCTATGGCGTGGTGCTGTTGGAGATCATATGTTGCAGAAGGAATATAGACGTGAATGCTCCTTCAGAAGAGGAAATAATGCTTTCTAGTTGGGTATATAATTGCTTTGTGAGAGGGGAATTGAATAAATTGGTAGTAGATGAAGATGTGGAATGGATTACATTGGAGAGAATGGTGAAGGTGGCCTTATGGTGCGTCCAAGAGGACTCATCTCTACGTCCTTCCATGAAGAATGTGATATTGATGTTGGAAGGGTTGAAACATATTCCAATTCCTCCATCTCCAATGCCTCCTATGGTTTGTGAATAG 2334 0.4057 MSPIPLFLLSVVLSANQVRAQNNDSNVINLGSSLSPKTNSTSWVSLSGHFSFGFYPQDNGFAVGIWLMGEPEGTIVWTPNLKNLSASSDSVIELTKEGQLLLRNEKQMEVVIANASEPAVSASMLDSGNFVLYSKNHSVVWQSFDSPTDTILGGQNLSEGQNLTSANGHFTLNMQSDGNLVAYPVNNEREDDAYWHSNTSQLLVSQLTLNLTGFLCLSDDDGDTIKVLASRSNRGRNTSLIYCATLDLDGIFRLYVHTFEKNTGFTSQILWEAISDHCQVKGFCGLNSYCFIVAGKAECKCYPGFSPISGNNSMFLVCDQTMKNDCITSRDPRMLYNISSPLQHMQWSLIPYWNMQLEMEACGKSCQEDCDCGAVLHEDGSCKKYKLPLAFGRINNTVSTTALFKLPSMNAIHPKKPEVVVDHKKNLIFTLLIVLGSILFLCLVFAISIFFIYMHKVYSYTKLAASSENLGFVEDCSLRTFTFDELVNATRNFKEEIGRGSFGVVYNGTIQGNHQRIAVKKLDNVVDEGEREFQAEITAIAQTHHRNLVQLIGYCINGSRKLLVYEYMSNGSLADFLFKAQMHLSWKQRVKIALDVARGILYLHEECEVCIIHCNIKPRDILLDEMWTAKVSDFGLARLSMPEQSRTRSSNESTSGYVAPERQKDALASVKVDIYSYGVVLLEIICCRRNIDVNAPSEEEIMLSSWVYNCFVRGELNKLVVDEDVEWITLERMVKVALWCVQEDSSLRPSMKNVILMLEGLKHIPIPPSPMPPMVCE 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3680g00004 777 SMART blect_4 148 265 IPR001480 -
Pral3680g00004 777 SMART blect_4 25 147 IPR001480 -
Pral3680g00004 777 PIRSF SRK 1 776 IPR024171 GO:0004674
Pral3680g00004 777 CDD STKc_IRAK 497 761 - -
Pral3680g00004 777 Gene3D - 148 280 - -
Pral3680g00004 777 ProSiteProfiles Protein kinase domain profile. 491 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00004 777 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 769 - -
Pral3680g00004 777 ProSitePatterns Protein kinases ATP-binding region signature. 497 521 IPR017441 GO:0005524
Pral3680g00004 777 FunFam S-receptor-like serine/threonine-protein kinase 460 567 - -
Pral3680g00004 777 Pfam D-mannose binding lectin 74 158 IPR001480 -
Pral3680g00004 777 Pfam Protein tyrosine and serine/threonine kinase 493 755 IPR001245 GO:0004672|GO:0006468
Pral3680g00004 777 Gene3D Transferase(Phosphotransferase) domain 1 568 767 - -
Pral3680g00004 777 ProSiteProfiles Bulb-type lectin domain profile. 148 267 IPR001480 -
Pral3680g00004 777 Gene3D Phosphorylase Kinase; domain 1 456 567 - -
Pral3680g00004 777 Gene3D - 21 146 IPR036426 -
Pral3680g00004 777 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Pral3680g00004 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 152 261 IPR036426 -
Pral3680g00004 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 160 IPR036426 -
Pral3680g00004 777 SUPERFAMILY Protein kinase-like (PK-like) 475 760 IPR011009 -
Pral3680g00004 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3680g00004 Pral-Chr3680 77004 79337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3680g00004 466 773 Glycoside Hydrolase AT3G07070 38.390 5.68e-64 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3680g00004 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3680g00004 - - aip:107630435 818.92