Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3680g00003 ATGGCTACCACTGCATCAAACCTCTACTTCCTTCTATTGGTATCTTTTCTTTGTGGAAGATTTGAAACAGCACACGCAAATCAACTCATAAAGCTCGGTGCTTCCCTATCTCCCATTGGCCGTCCCAGTTCATGGCCTTCACCTTCTGGTCGATTTTCATTCGGCTTTTATCATCAAGACAATGGCTTCAAAGTTGGAATCTGGCTGTTCGATGGGATTAATAAAACAATTGTTTGGACTTCAAATCGCGATGATCCTCCTGTTTCCTCAAATGCAAGGCTTGTTCTGACCATAAATGGTGAGCTTCTTCTGCAAACAGGTCCAGGGCAAAACAGGGTTATTGCTCATAGTAACAATGGAACTGTTTTCTATGCTTCCATGCTTGATTCTGGAAACTTTGTTCTGCGAAACAAAAGTTTAGAAATCCTTTGGCAGAGTTTTGATTACCCAACTGACACCCTATTAGGGGGACAAATTCTACCTACGGGGGGTCAATTGTTATCGAGTTCATCAGACACGAACCATTCTTCTGGAAGGTTTCAGCTCTCAATGCAGGCTGATGGAAACCTTGTTCTGTACCCACGGTATTCTGCTGACACACCTTCGGATGCTTACTGGGCCTCTAATACTGATTATGGCACTAGTTTCAAATATTATCTTTTGCTCAACAGCTCAGATACTCAGCCTCTAAATATTGTGAATGCCAGTAGTTCCAACTCAGAAATTCTTTGGAGGGATGTTACCAGCTTCAACTTCTCCAAAGGGAACAACACTATTTATCGTGCAACTGTTGATTCTGATGGAGTTTTACGACTCTATGCTCATTTTGACGACGCAAATCGGAAACATCAAGTTACAAACTTCTGGTCACCGCGAGATTTGGACAACCTTTGTAAAGTGAAGGCTTTTTGCGGGTTCAACAGCTACTGTACCATTAATGACAACCAGCCTTACTGCAATTGTCTTCCGGGAACTGATTTTATAGACCCAAGTTACCATAATCTTGGATGCAAGAGGAACTTCTCAGAAGCAGAATGTAAAGGTAGAAAAGATAATGCAACTTTTTATTACATGTCCCCTATGAGTGATATGAGCTTGGGTGATCTTCCTTACGTTGAAGAAGAGATTCGGGAGGAGGAATGCTCGTCTTCTTGTTTGCAAGATTGCTATTGTGGGGCTGCCTTTTATGACAATAATCGCTGCAAGAAACAAGAGTTTCCATTAAGATATGTCGGCAGAGAAACACAAGGGTCCTCTTCCTCACCCTACACATTATACATCAAGGTGGGAAATCAGAGTCTCAAAAGCAGAGATGAACCCAACCAGCCACCTCCCATCAAGACTACGAGTAAGAAAGCAATTAAGGTGATCATTCTCATTGTCTTGGGTTTTGCAATTCTTTTATGTTCATCTGTTGCAGCCTCTAGCCGATTTATATACAACACTGGAGTTTTAAGTTACAAGAGGTTGTTGGAGATTGGAGATTTAGGCTTGAGCGATGGGATTACTCTGAGGGTATTTTCATACAATGAGTTGAAGAAAGCAACAGATAGTTTCAAACAAGAGGTGGGTAAGGGCTCCTTCGGATCCGTTTACAGAGGAACTTTACAAAAAGGAAGAAAACTGATTGCTGTAAAAAGGCTGCACAGATTAATTGAAGAAGGAGAGAGAGAATTTCAAGCAGAAATGCAAGCCATTGGGAAAACACACCACAAAAACTTAGTCCGCTTGCTGGGATATTGTGCTGAGGGATCTAAAAGGCTTCTAGTTTATGAGTACATGAGCAATGGCTCCCTTGAGAAGCTCATCTTTGGTGATAGCACCATACGTCCAGATTGGGAGCAGAGAAGAAGGATAGCATTGGACATTGCAAGAGGCTTACTATATCTGCATGAACAATGCAAGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTCTTGACAGCTAAAATATCAGATTTTGGGTTAGCAAAACTTCTAATGCCTGATCAAACAAGAACCTTCACCCAAGTTAGAGGGACAAGAGGTTATTTGGCTCCGGAATGGAATAAGAACACTCCAATAACAGTGAAAGCGGATGTTTATAGCTACGGAGTAATGCTTTTGGAGATTGTTTTTTGCAGAAGAAGCCTAGTGGTGAACATGTCAAATCCAGAACAAATTGTTCTATCAAATTGGGTGTACAAGTGTTTTGCTCGGAGAGAGCTAAACAAGCTGGTTGTCGGGGAAGAAGTGGATAATAGTTTACTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGACGAGCCTTTTCTTCGGCCATCGATGAAGAGTGTGGTGTTGATGCTTGAGGGAGTTACTGAGGTGGCTGTTCCTCCTTGTCCATCCCCTGATTCTATTTGA 2409 0.4193 MATTASNLYFLLLVSFLCGRFETAHANQLIKLGASLSPIGRPSSWPSPSGRFSFGFYHQDNGFKVGIWLFDGINKTIVWTSNRDDPPVSSNARLVLTINGELLLQTGPGQNRVIAHSNNGTVFYASMLDSGNFVLRNKSLEILWQSFDYPTDTLLGGQILPTGGQLLSSSSDTNHSSGRFQLSMQADGNLVLYPRYSADTPSDAYWASNTDYGTSFKYYLLLNSSDTQPLNIVNASSSNSEILWRDVTSFNFSKGNNTIYRATVDSDGVLRLYAHFDDANRKHQVTNFWSPRDLDNLCKVKAFCGFNSYCTINDNQPYCNCLPGTDFIDPSYHNLGCKRNFSEAECKGRKDNATFYYMSPMSDMSLGDLPYVEEEIREEECSSSCLQDCYCGAAFYDNNRCKKQEFPLRYVGRETQGSSSSPYTLYIKVGNQSLKSRDEPNQPPPIKTTSKKAIKVIILIVLGFAILLCSSVAASSRFIYNTGVLSYKRLLEIGDLGLSDGITLRVFSYNELKKATDSFKQEVGKGSFGSVYRGTLQKGRKLIAVKRLHRLIEEGEREFQAEMQAIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLEKLIFGDSTIRPDWEQRRRIALDIARGLLYLHEQCKAPIIHCDIKPQNILMDEFLTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGVMLLEIVFCRRSLVVNMSNPEQIVLSNWVYKCFARRELNKLVVGEEVDNSLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTEVAVPPCPSPDSI 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3680g00003 802 CDD STKc_IRAK 523 787 - -
Pral3680g00003 802 ProSiteProfiles Protein kinase domain profile. 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00003 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 793 - -
Pral3680g00003 802 FunFam Serine/threonine-protein kinase 151 301 - -
Pral3680g00003 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 274 IPR036426 -
Pral3680g00003 802 CDD B_lectin 47 150 IPR001480 -
Pral3680g00003 802 ProSiteProfiles Bulb-type lectin domain profile. 21 148 IPR001480 -
Pral3680g00003 802 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Pral3680g00003 802 Gene3D Transferase(Phosphotransferase) domain 1 594 792 - -
Pral3680g00003 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 210 IPR036426 -
Pral3680g00003 802 SMART serkin_6 517 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00003 802 ProSiteProfiles Bulb-type lectin domain profile. 151 285 IPR001480 -
Pral3680g00003 802 Pfam Protein kinase domain 520 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00003 802 Gene3D - 151 298 - -
Pral3680g00003 802 SMART blect_4 36 150 IPR001480 -
Pral3680g00003 802 SUPERFAMILY Protein kinase-like (PK-like) 503 786 IPR011009 -
Pral3680g00003 802 Gene3D - 27 148 IPR036426 -
Pral3680g00003 802 Gene3D Phosphorylase Kinase; domain 1 499 593 - -
Pral3680g00003 802 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 798 - -
Pral3680g00003 802 FunFam Serine/threonine-protein kinase 150 285 - -
Pral3680g00003 802 PIRSF SRK 1 802 IPR024171 GO:0004674
Pral3680g00003 802 FunFam S-receptor-like serine/threonine-protein kinase 495 593 - -
Pral3680g00003 802 Pfam D-mannose binding lectin 76 158 IPR001480 -
Pral3680g00003 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3680g00003 Pral-Chr3680 55593 58001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3680g00003 507 795 Receptor kinase-like Gene Family AT5G20050 42.949 5.18e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3680g00003 Pkinase 7.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3680g00003 - - pcin:129309635 1059.28