Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3680g00001 ATGGCGGCTTCCATAACTCTGTTCTTGGTCTTCGCAGTGCTTTCTGCAAACCAAGTTATAGCTGAAATCAATGATCCAACCATCATTGGTTTGGGTTCTTGGCTCTCCCCAGAATCAAATTCTACTTCATGGCTGTCACCCTCTGGTCATTTCGCCTTCGGCTTTTATCCTCAAGGTAAAGCCTTTGTTGTTGGAATATGGCTGAGCCACGAACCTGAGAATATAACTGTATGGACTGCTTATCGCAACAGTCCACCATTATCATCAGATTCTGTGATCGAGTTAACTAAAGACGGCCTTCTGCTTAACGAGACTGGGATAAGAACATCCATTACTAATGCGTCATTTGCAGTGCCTGCACATTCAGCGTCTATGCTTGATTCGGGCAATTTCGTGATTTATGATGAGAATCAAAGTGTTATCTGGCAAAGCTTCGATCTCCCCACCGACACCATATTAGGAGGTCAAACTTTATCTCCTCAACAAAATCTGGTCTCTTCTTTGTCCAAATCCGACCACACGAGTGGAAACTTCATTCTCATCATGCAGGATGATGGGAATCTTGTGGCCTACCCTGTAAACAATCGAAGGAGAGATGATGCTTACTATGCCTCCATGACTTCTGGGTATGTCTCGCTTTCTCTTAATCTTACAGGCTTTCTTTGCTTGGTTGATAGAAGCAACACTACTTTAAGGGTTTTGGGGCATAGTAACATTACTGGGTATAACACAAGCCTAGTCTACCGTGCAACACTTGATGTGGATGGGATATTTAGATTTTATGTGCACAGATTTGAGAGGAATGCCAAATCAACTGTCTCTATTGTGTGGCGTAATCTTCTTGATCAATGTGATGTCAAAAGTTTTTGTGGCTTCAACAGTTATTGTTCCTCCATCTCTGGCAAAGTTGTTTGTCATTGTTATCCTGGATTCACACCCGTCAATAATGTGAATGAAAGCATGTTTTTGGACTGTGAACCAACCAGCCAGTATGACTGTAAAACTAGTAAAGATCCAAAGATGGTATACAATGTTAGTAAGCCATTCCAACATATGCAATGGGGTCTTATTCCTTATTTGGCCATGCCCATGAAAATAGAAGCTTGTGGGAAGTCTTGCAATGAAGACTGTAATTGTGGGGCAGCGTTACATGATGATGGAATCTGCAAAATGTTTAGGCTTCCGCTTAGATTTGGCAGAATTAATAATAATGTATCAACCAGAGCCCTCTTCAAGTTGCCTTCAACAAATGAGATTCCCCTAAATGTAAAGAAGCCAGAGGTTCTTGTTGATGACAAGAAAAATCTGATTTTTACTCTGATCATTACTCTAGGTTCGATTTCATTTCTCTGCTTGGTCTTTGCAATATCTAGTTTCTTCATTTACATGCGCAAAGTCTATTCATACACAAACCTCTCCACCAGTAGCGAAAATTTGGGGTTCGCTGAGGATTGTGGTTTGCGAACTTTTGCCTTTGATGAATTGGTGAATGCAACGGGAAATTTCACAGAAGACATTGGTAGAGGATCTTTTGGGGTGGTTTACAAAGGGACAATTGGAGAAAGCAACAGAAGGATTGCAGTGAAGAAACTAGACATTGTCATTGATGGAGGAGAAAGAGAATTTCAAGCTGAAATCACTGCAATCGCTAGAACTCATCACAGAAATCTGGTTCAACTCATTGGTTACTGTATTGATGGTTCAAGAAAGTTTCTTGTTTATGAATACATGAGCAATAGATCTCTGGCAGATTTTCTGTTCAAGGTTGAGATGCATCTATCTTGGAAACAAAGAGTCAAAATCGCATTGGATATAGCAAGAGGAATCCTATATCTGCATGAAGAATGTGAAGTTTGTATTGTCCATTGCAATATCAAGCCTCAAAACATCCTCTTGGATGAAATGTGGACGGCAAAAATATCTGATTTTGGACTTGCAAGGCTATCATCAATGCCAGAACATTCAAGAACCAGAAGTATCAATGAATTAACCAGTAGCTATGTGGCACCTGAACGGCAAAAAGATGCATCGACATCTATAAAAGTTGACATTTACAGCTATGGCGTGGTGCTGTTAGAGATCATATGTTGCAGAAGGAATATAGATGTGAATGTTCCTTCAGAGGAGGAAATAATGCTCTCAAGTTGGGTGTATAATTGTTTTGTGAAAGGGGAGTTGAAGAAACTTGTAGTGGATGAAGATGTAGAATGGATGACACTGGAGAGAATGGTGAAGGTGGCGTTATGGTGTGTTCAAGAGGACTTGTCTCTACGTCCTTCCATGAAGAATGTGATACTGATGTTGGAAGGCTTGAAACATATTCCAATCCCTCCATCTCCAATCCCACTTCCTTGA 2355 0.4064 MAASITLFLVFAVLSANQVIAEINDPTIIGLGSWLSPESNSTSWLSPSGHFAFGFYPQGKAFVVGIWLSHEPENITVWTAYRNSPPLSSDSVIELTKDGLLLNETGIRTSITNASFAVPAHSASMLDSGNFVIYDENQSVIWQSFDLPTDTILGGQTLSPQQNLVSSLSKSDHTSGNFILIMQDDGNLVAYPVNNRRRDDAYYASMTSGYVSLSLNLTGFLCLVDRSNTTLRVLGHSNITGYNTSLVYRATLDVDGIFRFYVHRFERNAKSTVSIVWRNLLDQCDVKSFCGFNSYCSSISGKVVCHCYPGFTPVNNVNESMFLDCEPTSQYDCKTSKDPKMVYNVSKPFQHMQWGLIPYLAMPMKIEACGKSCNEDCNCGAALHDDGICKMFRLPLRFGRINNNVSTRALFKLPSTNEIPLNVKKPEVLVDDKKNLIFTLIITLGSISFLCLVFAISSFFIYMRKVYSYTNLSTSSENLGFAEDCGLRTFAFDELVNATGNFTEDIGRGSFGVVYKGTIGESNRRIAVKKLDIVIDGGEREFQAEITAIARTHHRNLVQLIGYCIDGSRKFLVYEYMSNRSLADFLFKVEMHLSWKQRVKIALDIARGILYLHEECEVCIVHCNIKPQNILLDEMWTAKISDFGLARLSSMPEHSRTRSINELTSSYVAPERQKDASTSIKVDIYSYGVVLLEIICCRRNIDVNVPSEEEIMLSSWVYNCFVKGELKKLVVDEDVEWMTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKHIPIPPSPIPLP 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3680g00001 784 ProSitePatterns Protein kinases ATP-binding region signature. 506 530 IPR017441 GO:0005524
Pral3680g00001 784 PIRSF SRK 1 783 IPR024171 GO:0004674
Pral3680g00001 784 Gene3D Transferase(Phosphotransferase) domain 1 577 776 - -
Pral3680g00001 784 Pfam D-mannose binding lectin 76 159 IPR001480 -
Pral3680g00001 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 166 261 IPR036426 -
Pral3680g00001 784 FunFam Serine/threonine-protein kinase 149 287 - -
Pral3680g00001 784 FunFam S-receptor-like serine/threonine-protein kinase 467 576 - -
Pral3680g00001 784 Pfam Protein kinase domain 503 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00001 784 Gene3D - 32 146 IPR036426 -
Pral3680g00001 784 FunFam Putative receptor-like protein kinase 577 775 - -
Pral3680g00001 784 ProSiteProfiles Bulb-type lectin domain profile. 31 146 IPR001480 -
Pral3680g00001 784 Pfam S-locus glycoprotein domain 243 314 IPR000858 GO:0048544
Pral3680g00001 784 SUPERFAMILY Protein kinase-like (PK-like) 485 770 IPR011009 -
Pral3680g00001 784 Gene3D Phosphorylase Kinase; domain 1 465 576 - -
Pral3680g00001 784 FunFam Serine/threonine-protein kinase 148 274 - -
Pral3680g00001 784 Gene3D - 148 280 - -
Pral3680g00001 784 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3680g00001 784 SMART blect_4 35 148 IPR001480 -
Pral3680g00001 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 205 IPR036426 -
Pral3680g00001 784 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3680g00001 Pral-Chr3680 30837 33384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3680g00001 421 784 Receptor kinase-like Gene Family AT5G10530 34.656 6.15e-62 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3680g00001 Pkinase 9.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3680g00001 - - pcin:129308930 820.846