Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral367g00008 ATGAACAATGGCTTTGTGGTTGATTGGCGGAGAGCCATGGATTGCTCTGAGTGTGAGATATCTGGAGGACTTTGTGGCCACAATCCAACCAATCATCAGACGCTATGCTTTTGGAGGGATGGCAGTATCGCAACCAAAAGCTGCAGCAAAGCCAGAACAGGAGGACGTGCATTAAGAAATAAACTCATTATAGATGTCAAGAAAATGACCAACTCTTTCAAAGATAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAGGGAAAACTCCTCAATGGCCGCCCTGTTGCTGTAAAGTTATTGAAGGCATCAAAACAGAATGGGGAAGAATTTATCAACGAGGTTGCTAGCATCAGTAGGACTTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTTGAAGGCAAACAAAAGGCTCTCATATATGAATTTATGTCCAATGGATCTCTTGACAAGTTCATTCCCAGCAATGTGGATAAAAATAGTATCTGCTTGACTTGGGAAAATTTGTACCAAATCGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCACAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGCCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCTTCATTTCAATTTCAGAAGCAAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAACATAGGTGGAGTTTCCTATAAGTCTGATGTTTATAGCTATGGGATGATGTTATTAGATATGGTTGGAGGGAGAAAGAACAAGAATGTTGAAACCAATTGTTCGACTGAGAAATATTTCCCAGATTATATTTATGCTCAACTTGAGCAAGACAGCAGTTTGGGATGTGATGGGGCCGATAACACGGGGGAAAATGATATTACAAAGAAAATGACCATTGTGGCTTTGTGGTGCATCCAAACATTTCCAGGTCAAAGACCTACAATGAGTAGAGTGATTGAAATGTTAGAAAGAAGACCTGACCTGTTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCTCCCAGGTTAGAACTAGAATCTTCCACCACTGTTACTACCACAACAGAAATTGTGGGTTTTCAAAGCCCTTCCCACATGTTGCTAGAGGAACACTAG 1182 0.4036 MNNGFVVDWRRAMDCSECEISGGLCGHNPTNHQTLCFWRDGSIATKSCSKARTGGRALRNKLIIDVKKMTNSFKDKLGQGGYGSVYKGKLLNGRPVAVKLLKASKQNGEEFINEVASISRTSHVNVVTLLGFCFEGKQKALIYEFMSNGSLDKFIPSNVDKNSICLTWENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESFISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNKNVETNCSTEKYFPDYIYAQLEQDSSLGCDGADNTGENDITKKMTIVALWCIQTFPGQRPTMSRVIEMLERRPDLLEMPPKPVMPSPPRLELESSTTVTTTTEIVGFQSPSHMLLEEH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral367g00008 393 MobiDBLite consensus disorder prediction 351 372 - -
Pral367g00008 393 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Pral367g00008 393 FunFam PR5-like receptor kinase 146 356 - -
Pral367g00008 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Pral367g00008 393 SUPERFAMILY Protein kinase-like (PK-like) 63 345 IPR011009 -
Pral367g00008 393 Pfam Wall-associated receptor kinase C-terminal 1 41 IPR032872 -
Pral367g00008 393 SMART serkin_6 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral367g00008 393 Pfam Protein tyrosine and serine/threonine kinase 73 344 IPR001245 GO:0004672|GO:0006468
Pral367g00008 393 PANTHER RUST RESISTANCE KINASE LR10-RELATED 65 366 IPR045874 GO:0004672
Pral367g00008 393 Gene3D Transferase(Phosphotransferase) domain 1 146 351 - -
Pral367g00008 393 Gene3D Phosphorylase Kinase; domain 1 40 145 - -
Pral367g00008 393 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral367g00008 Pral-Chr367 115048 146740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral367g00008 1 379 Receptor kinase-like Gene Family AT1G66910 44.647 9.81e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral367g00008 PK_Tyr_Ser-Thr 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral367g00008 - - pcin:129304394 479.559