Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral367g00004 ATGGCCGCCAAAAGGTTTTTCAATGATTCTGGTCCAGACCCAGACAACCGAAGCGATAAACGCATGAGACCCACTCGACCTTCTTTTGCTTCGATCATAGGAGAAGTGGTTATGGTGAAGAACATGCACAACCTTTTCTCTGCCTTGGAGCCTTTGCTCAGAAGAGTCGTTACTGAAGAGGTTGAAAGAGCTATGAGGCATTGTTGCCCACGTTCGTTGACTCGGTCTCCTTCTCTGCGAATCGAAGCATTTGAACAGCCACAAGCATCAGGCTATCAACTAATGTTCAGCAACAAGCTTTCTCTTCCAATATTCACGGGAACCAGGATTCTGGACATTGATGGCCAAAATATCCAAGTGATGCTTGTTCAGAAGAACGGTGACCAAATGGTTCGGACCAGTCTTCCCCAACCTATTAAGCTGGAACTTGTGGTTCTCGACGGAGATTTCCCCGCAGCCGACAAGGAGGCATGGACCACCGAGGAGTTCGATAAGAACATACTGAAGGAGAGAACCGGGAAACGGCCTTTGCTCACCGGAGAATTGAACCTCACCATGAGGGACGGGATTGCACCCACCTGTGATATTGAGTTCACCGATAATTCTAGCTGGATCAGAAGCCGCAAGTTCCGGGTCGCCGTCAGAGTTGCTCCGGGGAGTAACCTCGGTGTTCGGATTCGTGAAGGCATGACGGAGGCCTTTGTTGTGAAGGATCATCGTGGAGAACTGTACAAGAAACATCACCCACCAATGTTGAACGATGAAGTGTGGCGTCTGGAGAAGATTGGTAAAGACGGAGCTTTTCACAAGAAGTTGTCGTCGGAGAGTGTTAACACCGTCCAGGACTTCCTCAAGCTCTTCATCGTCGATCCTCACAAACTCAGAAAGATTCTAGGGATAGGGATGTCCGAGAAGATGTGGGAAGTGACTGTGAAGCACGCCAAGACGTGTGTAATGGGGACCAAAGTCTACATGTACCGTGGGTCCCACTTCGCCCTCTATCTGAATCCCATCTGCCAGCTCATTAAAGCTGAAATGAACGGCCACACTTTCCACGGCAAGGACATCAGCACCAACATTAATAGGACCTACATAGAGAAACTGGTGAAGGAGGCATATGCGAAGTGGAATTGCTTGGAAGAAATTGACCAACTTATGGGGAGTAACATGGCTCTACTAACCCAAGGGGACAGCATGGAGCAAATGCCAAACAACAGCATCAGCAACAATGAAGCAATATCATTTGGTAATGAGATGGACTTCTTGGGAGATAGCTACGCAACAAACAATGCGGAAATTGTAGGAAGTGGTGAGTGGGGACTGAATAATCCAGTATTCTCAACAGCATCGTACGTAAATGCCATGACTTATAACTTCTCCGAGACACAATCAGATGGGAATATAACGCCCTCTGCTTCTCTCATGGACGGTTCTGCAACTCCCAGATGGCCTTGA 1455 0.4818 MAAKRFFNDSGPDPDNRSDKRMRPTRPSFASIIGEVVMVKNMHNLFSALEPLLRRVVTEEVERAMRHCCPRSLTRSPSLRIEAFEQPQASGYQLMFSNKLSLPIFTGTRILDIDGQNIQVMLVQKNGDQMVRTSLPQPIKLELVVLDGDFPAADKEAWTTEEFDKNILKERTGKRPLLTGELNLTMRDGIAPTCDIEFTDNSSWIRSRKFRVAVRVAPGSNLGVRIREGMTEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSESVNTVQDFLKLFIVDPHKLRKILGIGMSEKMWEVTVKHAKTCVMGTKVYMYRGSHFALYLNPICQLIKAEMNGHTFHGKDISTNINRTYIEKLVKEAYAKWNCLEEIDQLMGSNMALLTQGDSMEQMPNNSISNNEAISFGNEMDFLGDSYATNNAEIVGSGEWGLNNPVFSTASYVNAMTYNFSETQSDGNITPSASLMDGSATPRWP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral367g00004 484 Pfam Calmodulin binding protein C-terminal domain 322 382 IPR046829 -
Pral367g00004 484 MobiDBLite consensus disorder prediction 10 24 - -
Pral367g00004 484 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Pral367g00004 484 MobiDBLite consensus disorder prediction 1 25 - -
Pral367g00004 484 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Pral367g00004 484 PANTHER OS02G0177800 PROTEIN 3 468 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral367g00004 Pral-Chr367 35501 39215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral367g00004 15 383 Calmodulin-binding Proteins AT5G57580 49.194 5.70e-122 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral367g00004 - - aip:107644281 611.298