Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3679g00054 ATGGAACAGACAGACAAGCCCAATGCTAAAAAGAAGTTCATAACAAAAAGAAGAAGCTTCAGAGGCGGAGCTAACCCTCATGAGCATCATCACTATCATCAGCATCAGCTGCTACAACAATACTCGACTCAGTTTGGGTTCTGCTACCAGAACGAGTATCAGAGGTACCACCCGGCTCTTCTTCCTCTACCTTCTCTTCTACCGCTGCAACTAGCTTTGACGCCATCGTTCACTCAAAACCAGACCGTCAAATCGAAAACCCATTCCCAGAAGTCTCCATGCAAGCTGAATAACTCTCCCTTTGCTGCCTCATCTTATAACAAAGTCTCAGCAGACACAGTTTCTCATGCTCCCAAGGGGTCTCATCAGCAAGCCACGGCGTCCCTTAAAGGAGATGATGGGAAGAAACTCATACCTGCCGGAAAACCACAGCCATTAGTTGCCGCAAGGAGGCCAGACTCCGGTGGCAAAGAGGGCTCTGCCATCTCGCTCCTTGCCAATCACTTTCTAGTGAAGTTCGATTCATCACAAAAAATATACCATTACAATGTTGAAATTACTCCCAATCCCTCCAAGCAAGTTGCCCGAGCAATCAAAGAGAAGTTTGTTAATAATAATTCTGCTGTGCTTTGTGGTGCTCTTCCCGCTTATGATGGGCAGAAGAATCTTTACAGCTCTGTTGAATTCCAGAATGATAAGCTTGAGTTTTACGTAAACCTGCCAATCCCAGCGAGCAAGGGCTCATCACCTGATAGAGAAATATGTGACTTGAAAGAGAGGCATGAACAGCTTAAACTGTTCCGAATAAATATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCGCAGGATTATCTCCATGCCTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAAGTGTATACCTGCGGGTAGGTCTTTCTATTCAACATCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTGCTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCCACTCAACAAGGACTTGCCCTCAATGTTGACTTTTCTGTGACTGCTTTCCATGAAAGCATAGGAGTGATTCCATATTTGCAGAAGCGTCTTGAGTTCCTTCGAGATCTTTCTGAAAAGAAGACAACAAGTTTAACAGGTCAAGAGAAGAAAGAAGTGGAGAAGGCCTTGAAGAACATCAGGGTCTTCGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTATGGCTTAACCGAGGAGGCTACTGAAAATCTTTGGTTTACTGACAGGGATGGAAAGAATCTGAGGCTCCTGAGCTATTTTAAAGATCACTATAACTATGACATACAATTTAGTAAATTGCCATGCTTGCAAATTAGTAGGAGCAAGCCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTTCTTGGGAAGCTTTCTGATGATCAAACTGCTAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAAGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAACTTGGAAATGGAGGTCATGTGACGAAGCTGGTTCCTTCACGCCATGACCGCCAGTGGAACCTTCTGGATGGTCATGTCTTTGAGGGAACTAAAATTGAGCGGTGGGCATTAATCGGCTTTGGTGGTACACCTGAACAGAAGTCCAAAGTCCCTAGCTTTATAAGCCAGCTATCACAAAGGTGTGCAGAAATGGGCATTTTTCTTAACAAGGACACAATTGTTGGGCCCCATTTTGAATCAGCTCAGGTGCTTAATAATGTCTCCCTTCTTGAATCTAAGCTCGAGAAAATCCAGAGAAGTGCCTCAAACAATCTACAGCTGCTCATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGTAAATTAAGTTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGATGCACTGTTGCCCTGTACAATTCACTTCCATGTCAAATTCCACGACTCTTCAAGTATGATGAACCTGCTATATTTATGGGTGCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCATCTGTTGCTGCCGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATATCAAGAATAAGGTCGCAAAAACACCGACAAGAAATCATCCAGGATCTTGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAGGTAAAGAAACTCCCGGGGAGAATAATTTTCTTTAGAGATGGGGTTAGCGAAACCCAATTCTACAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTCTTGGTTATAAACCATTCATTACTTTTGTAGTAGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGATCAGTCATCCACAAAAAATCATTATGGTTATGAGAATATCCCACCAGGGACTGTGGTTGACTCTGTGATCACTCATCCGAGGGAGTTCGATTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTACAACTTATGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCGTACAGAGGCAGACTCTACCTTGACAGGTCAGATTCCTCTGCTTTGTCTAAAGGTATCTCTTCACTATCTAGACCTGCACCTCCAAAGACAGCTCCTCTTCCAAAACTTAGTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3045 0.4325 MEQTDKPNAKKKFITKRRSFRGGANPHEHHHYHQHQLLQQYSTQFGFCYQNEYQRYHPALLPLPSLLPLQLALTPSFTQNQTVKSKTHSQKSPCKLNNSPFAASSYNKVSADTVSHAPKGSHQQATASLKGDDGKKLIPAGKPQPLVAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEITPNPSKQVARAIKEKFVNNNSAVLCGALPAYDGQKNLYSSVEFQNDKLEFYVNLPIPASKGSSPDREICDLKERHEQLKLFRINIKLVSKINGKELAKYLSKEEDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGAAGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSEKKTTSLTGQEKKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFTDRDGKNLRLLSYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGNGGHVTKLVPSRHDRQWNLLDGHVFEGTKIERWALIGFGGTPEQKSKVPSFISQLSQRCAEMGIFLNKDTIVGPHFESAQVLNNVSLLESKLEKIQRSASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPCQIPRLFKYDEPAIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQKHRQEIIQDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFLGYKPFITFVVVQKRHHTRLFPFETDQSSTKNHYGYENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDSSALSKGISSLSRPAPPKTAPLPKLSENIKKLMFYC 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3679g00054 1014 CDD Piwi_ago-like 534 974 IPR045246 -
Pral3679g00054 1014 Pfam PAZ domain 380 502 IPR003100 GO:0005515
Pral3679g00054 1014 Pfam Piwi domain 666 971 IPR003165 GO:0003676
Pral3679g00054 1014 SMART Piwi_a_2 665 975 IPR003165 GO:0003676
Pral3679g00054 1014 SUPERFAMILY Ribonuclease H-like 650 975 IPR012337 -
Pral3679g00054 1014 SMART PAZ_2_a_3 377 517 IPR003100 GO:0005515
Pral3679g00054 1014 Pfam N-terminal domain of argonaute 161 308 IPR032474 -
Pral3679g00054 1014 Pfam Argonaute linker 1 domain 319 367 IPR014811 -
Pral3679g00054 1014 Gene3D - 737 1014 IPR036397 GO:0003676
Pral3679g00054 1014 SMART DUF1785_2 317 369 IPR014811 -
Pral3679g00054 1014 ProSiteProfiles Piwi domain profile. 665 975 IPR003165 GO:0003676
Pral3679g00054 1014 MobiDBLite consensus disorder prediction 112 154 - -
Pral3679g00054 1014 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 141 976 - -
Pral3679g00054 1014 FunFam Protein argonaute 7 364 490 - -
Pral3679g00054 1014 SUPERFAMILY PAZ domain 364 522 IPR036085 GO:0005515
Pral3679g00054 1014 FunFam protein argonaute 10-like 734 1014 - -
Pral3679g00054 1014 Gene3D - 551 727 - -
Pral3679g00054 1014 MobiDBLite consensus disorder prediction 112 128 - -
Pral3679g00054 1014 FunFam Argonaute 10 551 727 - -
Pral3679g00054 1014 Gene3D paz domain 363 490 - -
Pral3679g00054 1014 CDD PAZ_argonaute_like 373 485 - -
Pral3679g00054 1014 ProSiteProfiles PAZ domain profile. 377 486 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3679g00054 Pral-Chr3679 778311 782895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3679g00054 65 1014 Eukaryotic Initiation Factors Gene Family AT1G48410 39.757 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3679g00054 K11593 - gmx:100797755 1663.66