Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3678g00001 ATGTTTGGGTTTAGGAAAGCAGCCCCTCCAAAGGAGGAGAACCCCGCAGGCTCAGTATCTTCCGCTCCTCCTGAGACAACCGTTAAACCAGAAAGAAGAACAACCTCAGAACCTGTCATACCAGCACCAAAATCCAAAGGAAACTACTTTGATGACGACGATGACGATGATGATTGGGGAAGAGGAAGAAAGACTTCTGCCACTTCATCATCTTCCTCGGCTGCTGCTAAAAACAGGTACAAGAACAATTTCCAGGACTCTGGGGGCCTAGAGAACCAGAGTGTCCAAGAGCTGGAAAACTATGCTGTATACAAGTCTGAAGAGACAACAAAGGATGTTAATAATTGTCTGAGGATAGCTGAGGACATCAAAGGGGATGCTACAAGGACCCTTGACATGCTGCACCAACAGGGTGAGCAAATCCACAGGACCCACAATATGATTGTTGAGACCGAGAAGGATTTAAGTCGGGGTGAAAAACTGCTGAACAATCTTGGAGGCATGTTCTCTATGCCCTGGAAGCCAAAGAAGACCAGGGAGATTAAAGGCCCCATAATTACACCAGACAAGCCATCCAAGACAAATGATAAGCAGCATAAGGAAGAGAGGGAAAAATTAGGCCTAAATGATGGTAAAGGAAAGGCAGTTTCTAAAACACCTCCTTCTGAGCCAACAAATGCATATCAGAAAATTGAGATGGAGAAGAACAAACAAGATGGCGCACTTGATGATCTGAGTAATATCTTGGGCGATTTAAAGGGTATAGCAGTTGACATGGGAACTGAACTTGACAGGCAAAACAAAGCACTTGATCATCTTAGTGATGATGTGGATGAACTGAATTCTCGAGTTAAGGGTGCCAACCAGCGTGCTCGTAAACTGCTAGCAAGTTAG 894 0.4485 MFGFRKAAPPKEENPAGSVSSAPPETTVKPERRTTSEPVIPAPKSKGNYFDDDDDDDDWGRGRKTSATSSSSSAAAKNRYKNNFQDSGGLENQSVQELENYAVYKSEETTKDVNNCLRIAEDIKGDATRTLDMLHQQGEQIHRTHNMIVETEKDLSRGEKLLNNLGGMFSMPWKPKKTREIKGPIITPDKPSKTNDKQHKEEREKLGLNDGKGKAVSKTPPSEPTNAYQKIEMEKNKQDGALDDLSNILGDLKGIAVDMGTELDRQNKALDHLSDDVDELNSRVKGANQRARKLLAS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3678g00001 297 CDD SNARE_Qc 235 293 - -
Pral3678g00001 297 MobiDBLite consensus disorder prediction 181 226 - -
Pral3678g00001 297 MobiDBLite consensus disorder prediction 64 92 - -
Pral3678g00001 297 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 232 294 IPR000727 -
Pral3678g00001 297 Gene3D - 215 296 - -
Pral3678g00001 297 FunFam SNAP25 homologous protein SNAP33 89 166 - -
Pral3678g00001 297 SMART tSNARE_6 227 294 IPR000727 -
Pral3678g00001 297 SMART tSNARE_6 98 165 IPR000727 -
Pral3678g00001 297 CDD SNARE_SNAP25N_23N_29N_SEC9N 100 164 IPR044766 GO:0005484|GO:0031201
Pral3678g00001 297 FunFam SNAP25 homologous protein SNAP33 229 296 - -
Pral3678g00001 297 SUPERFAMILY SNARE fusion complex 226 295 - -
Pral3678g00001 297 Coils Coil 263 297 - -
Pral3678g00001 297 SUPERFAMILY SNARE fusion complex 93 164 - -
Pral3678g00001 297 MobiDBLite consensus disorder prediction 181 211 - -
Pral3678g00001 297 MobiDBLite consensus disorder prediction 1 92 - -
Pral3678g00001 297 Gene3D - 89 167 - -
Pral3678g00001 297 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 65 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3678g00001 Pral-Chr3678 15831 18539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3678g00001 223 292 SNARE and Associated Proteins AT3G09740 40.000 9.45e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3678g00001 K18211 - gmx:100806781 405.601