Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3677g00009 ATGTCTATTTCTTCTCTGGCGACCGAAGTACCAGCAGGATGCTCACCGACTTCGGGTGGAATCTCGAACCGGATCAACCGCACCGGATCGGTGTCGATGACACGTCTCAAGTGGCGGGAGGAGAAGGCGGGAGCAGAGGAGGTGGATTGTGGTTTCCGGATCACTCTGCTCCGGGTGGCTCCACGGAACAAGCTGATAAGGCGAACGCGATGGCTGCCGATGCGTCTACATCCAATAATCAATCGGTGTCTTCGAGCTCCAGCGAGGATCCGCCCGAGAAGTCCACCGTCTCAGACGAAAAACCGCCGGAGATACCGTGAGATTAAAAGTAAAAAGAAGGGGCAGAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACAAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGCCAAAAGGCCGTAAAAAATAGTCCATTTCCTAGGAGCTATTATCGTTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTGGAACGCTCTTCGGAGGACCCAACCATTGTGATAACAACGTACGAAGGGCAACACTGTCATCACACTGTTGGGTTCCCTAGAGCAGCCGGAGCATCAATCATGACCCGTCATGAAGCCGCCGCCTTTGCAGCCGCCGGCCAGTTTGCTCCGACCATGTCACACTTCTATTATCCCATCCATTTACCATCAAGAGACGACACTAACCTTTCTTCTCTGGCCCCTCCTCCTCATCACTACCACCGACGCCAACAGGCACAGGAACATGAACCAGCTGCAAGATCATCCAGCACTGTAATGTGTCCACAGGATGATGCAACCTCGCGGCAGCCTCCCACCGATCAAGGACTTCTCGGAGACATTGTGCCCCCAGGAATGCGTAATGGATGA 900 0.5311 MSISSLATEVPAGCSPTSGGISNRINRTGSVSMTRLKWREEKAGAEEVDCGFRITLLRVAPRNKLIRRTRWLPMRLHPIINRCLRAPARIRPRSPPSQTKNRRRYREIKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRAAGASIMTRHEAAAFAAAGQFAPTMSHFYYPIHLPSRDDTNLSSLAPPPHHYHRRQQAQEHEPAARSSSTVMCPQDDATSRQPPTDQGLLGDIVPPGMRNG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3677g00009 299 MobiDBLite consensus disorder prediction 1 26 - -
Pral3677g00009 299 Pfam WRKY DNA -binding domain 135 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3677g00009 299 FunFam WRKY transcription factor 57 120 194 - -
Pral3677g00009 299 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 248 IPR044810 GO:0003700
Pral3677g00009 299 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3677g00009 299 SUPERFAMILY WRKY DNA-binding domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3677g00009 299 MobiDBLite consensus disorder prediction 87 117 - -
Pral3677g00009 299 MobiDBLite consensus disorder prediction 260 284 - -
Pral3677g00009 299 MobiDBLite consensus disorder prediction 96 117 - -
Pral3677g00009 299 Gene3D WRKY domain 121 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3677g00009 299 MobiDBLite consensus disorder prediction 238 299 - -
Pral3677g00009 299 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3677g00009 Pral-Chr3677 31256 37396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3677g00009 108 298 WRKY Transcription Factor Family AT1G69310 56.545 1.66e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3677g00009 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3677g00009 - - pcin:129321451 315.849