Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3677g00008 ATGGAAGACAAAGACAAAGCAGCATCATCATCCCGCCCTGCAATATCTCCGACTGAGTTCACCGCCGACTCTTCCAGCTGGGCGCTCGGGCCTGATGACTCTGACGATGTCTATTTCTTCTCTGGCGACCGAAGTACCAGCAGGATGCTCACCGACTTCGGGTGGAATCTCGAACCGGATCAACCGCACCGGATCGGTGTCGATGACACGTCTCAAGTGGCGGGAGGAGAAGGCGGGAGCAGAGGAGGTGGATTGTGGTTTCCGGATCACTCTGCTCCGGGTGGCTCCACGGAACAAGCTGATAAGGCGAACGCGATGGCTGCCGATGCGTCTACATCCAATAATCAATCGGTGTCTTCGAGCTCCAGCGAGGATCCGCCCGAGAAGTCCACCGTCTCAGACGAAAAACCGCCGGAGATACCGATTAAAAGTAAAAAGAAGGGGCAGAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACAAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGCCAAAAGGCCGTAAAAAATAGTCCATTTCCTAGGAGCTATTATCGTTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTGGAACGCTCTTCGGAGGACCCAACCATTGTGATAACAACGTACGAAGGGCAACACTGTCATCACACTGTTGGGTTCCCTAGAGCAGCCGGAGCATCAATCATGACCCGTCATGAAGCCGCCGCCTTTGCAGCCGCCGGCCAGTTTGCTCCGACCATGTCACACTTCTATTATCCCATCCATTTACCATCAAGAGACGACACTAACCTTTCTTCTCTGGCCCCTCCTCCTCATCACTACCACCGACGCCAACAGGCACAGGAACATGAACCAGCTGCAAGATCATCCAGCACTGTAATGTGTCCACAGGATGATGCAACCTCGCGGCAGCCTCCCACCGATCAAGGACTTCTCGGAGACATTGTGCCCCCAGGAATGCGTAATGGATGA 1002 0.5349 MEDKDKAASSSRPAISPTEFTADSSSWALGPDDSDDVYFFSGDRSTSRMLTDFGWNLEPDQPHRIGVDDTSQVAGGEGGSRGGGLWFPDHSAPGGSTEQADKANAMAADASTSNNQSVSSSSSEDPPEKSTVSDEKPPEIPIKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRAAGASIMTRHEAAAFAAAGQFAPTMSHFYYPIHLPSRDDTNLSSLAPPPHHYHRRQQAQEHEPAARSSSTVMCPQDDATSRQPPTDQGLLGDIVPPGMRNG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3677g00008 333 MobiDBLite consensus disorder prediction 53 153 - -
Pral3677g00008 333 MobiDBLite consensus disorder prediction 294 318 - -
Pral3677g00008 333 MobiDBLite consensus disorder prediction 1 34 - -
Pral3677g00008 333 MobiDBLite consensus disorder prediction 11 28 - -
Pral3677g00008 333 MobiDBLite consensus disorder prediction 106 127 - -
Pral3677g00008 333 Gene3D WRKY domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3677g00008 333 Pfam WRKY DNA -binding domain 169 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3677g00008 333 SUPERFAMILY WRKY DNA-binding domain 160 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3677g00008 333 FunFam WRKY transcription factor 57 154 228 - -
Pral3677g00008 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 282 IPR044810 GO:0003700
Pral3677g00008 333 SMART WRKY_cls 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3677g00008 333 MobiDBLite consensus disorder prediction 272 333 - -
Pral3677g00008 333 MobiDBLite consensus disorder prediction 128 145 - -
Pral3677g00008 333 ProSiteProfiles WRKY domain profile. 163 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3677g00008 Pral-Chr3677 29995 37739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3677g00008 19 332 WRKY Transcription Factor Family AT1G69310 49.379 1.73e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3677g00008 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3677g00008 - - pcin:129321451 517.694