Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3675g00002 ATGGAAAGCCACAGTAGCAGTACCGAATACCGGTGGAGAGCTGAAGACGCCATTGCTGGCAACGCGAAAGCTCTTCAAGCTCTCAGAGAGCTCATCATATTCCCGCTTCTCTACTCCCGCCAAGCTAAGAAGCTCGGTATCAAATGGCCGCAAGGTTTGCTGCTGTACGGTCCTCCAGGCACTGGAAAGACAAGTCTAGTACGAGCAGTTGTTCAGGAATGTGGAGCACATTTGACAATCATCAGTCCTCATTCTGTCCATAAAGCACATGCTGGGGAAAGCGAGAGAATTCTCCGTGAGGCCTTTGCACAGGCATCATCTCATTCAACTTGTGGCAAGCCATCAGTTATCTTTATAGATGAAATAGATGTACTCTGTCCTCGGCGAGATTCAAAGAGGGAGCAAGATGTTCGGATTGCTTCCCAGCTTTTTACATTGATGGATTCAAATAAACCATCCTCATCCACACCAAGAGTTGTTGTCGTTGCATCAACTAACAGGGTGAATGCAATTGATCCAGCCCTTAGAAGGTATGGACGTTTTGATGCTGAAATTGAAGTTACTGCCCCAAATGAAGAGGAGCGTTTTCAAATTCTTAAGCTTTACACAAGGAAGATTCCCTTGGATCCCAGTGTTGACTTAATGATAGCTGCATCTTGCAATGGATATGTTGGGGCTGATTTGGAAGCCTTGTGCCGTGAGGCTACTACATTAGCAGCTAAAAGGTCCGGAGATGCAAATGGAAATGCTGGTCTCTTAAGCATAATGATGGAAGATTGGAACAATGCGAGATCTGTTGTTGGTCCAAGCATAACAAGAGGTGTTACAGTGGAAATTCCTAAAGTGACTTGGGATGATATTGGCGGATTAAAAGAATTAAAAAAAAAGCTTCAGCAAGCTGTTGAATGGCCTATCAAGCATTCTGAAGTATTTTCTAGATTGGGCATTTCCCCAGTGCGAGGGATTCTCTTGCATGGGCCTCCAGGATGTTCCAAAACAACCCTTGCCAAAGCTGCTGCACATGCAGCCCAAGCTTCTTTCTTTTCCTTGAGTGGTGCAGAAATGTATTCGATGTATGTAGGAGAGGGGGAAGCATTGCTTCGGAATACATTTCATAGGGCACGGCTTGCAGCACCCAGCATAATATTTTTTGATGAGGCTGATGTGGTAGCCGCAAAACGGGGTGATTCTTCAAGCAATAGCAGTACGGTTGGAGAGAGGCTTTTATCCACCCTCCTGACTGAAATGGATGGTTTAGAAGAAGCTACAGTAAGCTTTCTGTGA 1284 0.4533 MESHSSSTEYRWRAEDAIAGNAKALQALRELIIFPLLYSRQAKKLGIKWPQGLLLYGPPGTGKTSLVRAVVQECGAHLTIISPHSVHKAHAGESERILREAFAQASSHSTCGKPSVIFIDEIDVLCPRRDSKREQDVRIASQLFTLMDSNKPSSSTPRVVVVASTNRVNAIDPALRRYGRFDAEIEVTAPNEEERFQILKLYTRKIPLDPSVDLKXIAASCNGYVGADLEALCREATTLAAKRSGDANGNAGLLSIMMEDWNNARSVVGPSITRGVTVEIPKVTWDDIGGLKELKKKLQQAVEWPIKHSEVFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAEMYSMYVGEGEALLRNTFHRARLAAPSIIFFDEADVVAAKRGDSSSNSSTVGERLLSTLLTEMDGLEEATVSFL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3675g00002 428 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 57 76 - -
Pral3675g00002 428 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 404 423 - -
Pral3675g00002 428 Pfam ATPase family associated with various cellular activities (AAA) 323 423 IPR003959 GO:0005524|GO:0016887
Pral3675g00002 428 Pfam ATPase family associated with various cellular activities (AAA) 53 187 IPR003959 GO:0005524|GO:0016887
Pral3675g00002 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 243 IPR027417 -
Pral3675g00002 428 SMART AAA_5 49 191 IPR003593 GO:0016887
Pral3675g00002 428 SMART AAA_5 319 421 IPR003593 GO:0016887
Pral3675g00002 428 CDD RecA-like_CDC48_NLV2_r1-like 17 187 - -
Pral3675g00002 428 PANTHER AAA-FAMILY ATPASE 15 422 - -
Pral3675g00002 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 281 421 IPR027417 -
Pral3675g00002 428 Gene3D - 190 270 - -
Pral3675g00002 428 FunFam ATPase family, AAA domain-containing 2B 281 427 - -
Pral3675g00002 428 FunFam Cell division control protein 48 homolog B 10 188 - -
Pral3675g00002 428 Pfam AAA+ lid domain 211 247 IPR041569 -
Pral3675g00002 428 Gene3D - 271 426 IPR027417 -
Pral3675g00002 428 Gene3D - 5 188 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3675g00002 Pral-Chr3675 4252 10526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3675g00002 254 422 Calmodulin-binding Proteins AT3G56690 48.521 2.10e-49 178