Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3673g00064 ATGAACCTGGAAGAGAAAGTCACCATGGACTTGGTTCAGCCACCTGAACACTTCTGCTATATCCGTTGCAGCTTCTGCAGCACTGTGCTTGCGGTTGGGATCCCATGCAAGAGGCTGCTGGACACAGTGACAGTGAAGTGTGGGCATTGCAGCAGCCTGTCCTTCCTCAGCACCAGTCCTCCTCCGTCGCATCACAATCATACCGAAACCCATCATCGTGATAATGATAATAACAATATTGGTCACACACTCACTCTCCAGGGGTTTTATAGTGATTACAAGAAGGGACTTGCATCATCCTCGTCCTCCTCGTCTTCCTTAACTACGTCGTCCAATGATCCTGTGTCCCCCAAGGCAGCACCTTTCGTTGTCAAACCTCCTGAGAAGAAACACAGACTTCCCTCGGCTTACAATCGCTTTATGAAAGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATTCCTCATCGGGAAGCTTTCAGTGCTGCTGCCAAAAATTGGGCAAGGTACATTCCAAATTCGCCAAGCACTTCACTTTCAGGAAGTAAGAACAAGGAATGA 564 0.4876 MNLEEKVTMDLVQPPEHFCYIRCSFCSTVLAVGIPCKRLLDTVTVKCGHCSSLSFLSTSPPPSHHNHTETHHRDNDNNNIGHTLTLQGFYSDYKKGLASSSSSSSSLTTSSNDPVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSPSTSLSGSKNKE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3673g00064 187 FunFam protein CRABS CLAW isoform X3 123 182 - -
Pral3673g00064 187 SUPERFAMILY HMG-box 115 169 IPR036910 -
Pral3673g00064 187 PANTHER PROTEIN YABBY 6-RELATED 13 183 IPR006780 GO:0007275
Pral3673g00064 187 MobiDBLite consensus disorder prediction 101 116 - -
Pral3673g00064 187 MobiDBLite consensus disorder prediction 101 131 - -
Pral3673g00064 187 CDD HMG-box_SF 132 168 - -
Pral3673g00064 187 MobiDBLite consensus disorder prediction 57 81 - -
Pral3673g00064 187 Gene3D High mobility group box domain 115 175 IPR036910 -
Pral3673g00064 187 Pfam YABBY protein 14 171 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3673g00064 Pral-Chr3673 873397 875272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3673g00064 1 185 C2C2-YABBY Transcription Factor Family AT1G69180 60.317 1.64e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral3673g00064 YABBY 8.8e-56 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3673g00064 K25796 - gmx:100819079 258.07