Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3673g00022 ATGGATTTGCAGAGTAGTAGCCAATCATCTTCTTCAACATCATCTTCATTAACTTCTGCAAGTATCTGGAGAAGTGATCATGTCGTGTATCTAAGTTTCATTTCTGAGGATACTTGTTCATTTGTTCGAGATCTTTCTGACGCTCTAAATAGAAGGGGTTTGCCTAATAACGGCTACTCCTGGAAATCCATTAATCCCGACCAACATCCCTTAGAGAAATACAAGATTTATGTGGTTCTCTTCTCCCAAAAATATATTGTCTCAACTAGCCCCCAGCAGGAACTTGCAGCCATGGCGGTTGAGTGCATGAACACACCAGGTCACAGCTTTCTGCCAATTTTCTACAAGTTAGATCCGTCTCAAGTACGAAATAGCTACTTTTTTCAGAATATACAAGAGTTTGAACGAGATTCTCACAAGTTCATAAAGGTGCAAAGATGGCTAGCTACCACTGTATTTACCCAACGTGAAGATTTGGTCGTACGAGATGAGACAGTGATAAAAGACATTGATCAAACTCTTAAAGAAATGGACAAATCTGGCTCCATATCTCCAGTGGAGATACAATCTCATCGTTTTAAAAAATTAATACGGCTTTTGGATTTAAACTCAACCAATGATGTTGTCCGATCCATAGGGATTTGTGGAATGGGAGGAATAGGCAAAACAGCTCTTGTGAAACAAGTGTTTAACAAGATCTCCCTCTTTAATGATTCATGTTTCCTTGCTAACGTAAGTGAATATGAATTCTTCATGGAAAAAGTACTTCTACGTCTAACCTTAAAACAAGAATGTGTATATTCAATGGACAACATTTGCAGAAGCCTGGGACAACGTAAGATGCTTATAGTTCTTGATGATGTTGATACGATAGAAAAGTCGAAATCTTTTCCTAGAAGCAAAGATGGGTTTGGAAGAGGAAGTAGAATTATCATAATATCAAGGGACCAGAACATCCTTAAGATGATCGAAGTTGATGAAATTCACAAAGTTGAGCTATTAAACACGGAGTAA 1014 0.3797 MDLQSSSQSSSSTSSSLTSASIWRSDHVVYLSFISEDTCSFVRDLSDALNRRGLPNNGYSWKSINPDQHPLEKYKIYVVLFSQKYIVSTSPQQELAAMAVECMNTPGHSFLPIFYKLDPSQVRNSYFFQNIQEFERDSHKFIKVQRWLATTVFTQREDLVVRDETVIKDIDQTLKEMDKSGSISPVEIQSHRFKKLIRLLDLNSTNDVVRSIGICGMGGIGKTALVKQVFNKISLFNDSCFLANVSEYEFFMEKVLLRLTLKQECVYSMDNICRSLGQRKMLIVLDDVDTIEKSKSFPRSKDGFGRGSRIIIISRDQNILKMIEVDEIHKVELLNTE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3673g00022 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 337 IPR027417 -
Pral3673g00022 337 Gene3D - 166 329 IPR027417 -
Pral3673g00022 337 PRINTS Disease resistance protein signature 275 289 - -
Pral3673g00022 337 PRINTS Disease resistance protein signature 211 226 - -
Pral3673g00022 337 Pfam TIR domain 72 176 IPR000157 GO:0007165
Pral3673g00022 337 Pfam NB-ARC domain 210 337 IPR002182 GO:0043531
Pral3673g00022 337 Gene3D - 2 149 IPR035897 -
Pral3673g00022 337 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 329 IPR044974 GO:0006952
Pral3673g00022 337 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 131 IPR035897 -
Pral3673g00022 337 ProSiteProfiles TIR domain profile. 25 174 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3673g00022 Pral-Chr3673 236794 238768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3673g00022 41 335 WRKY Transcription Factor Family AT4G12020 26.452 2.52e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3673g00022 - - pcin:129321910 202.216